| Lane | Total # Reads / Lane | Total # PF Reads / Lane | Undetermined |
| 3 | 212,814,163 | 176,065,128 | 94.32% |
| Library | Read Count | Portion | Perfect |
| hyb_t12 | 1,304,394 | 13.038% | 2.27% |
| hyb_t11 | 291,820 | 2.917% | 4.99% |
| hyb_t1 | 373,359 | 3.732% | 4.12% |
| hyb_t6 | 2,012,833 | 20.12% | 4.87% |
| hyb_t5 | 590,873 | 5.906% | 6.26% |
| hyb_t10 | 978,385 | 9.78% | 2.21% |
| hyb_t7 | 455,840 | 4.556% | 2.53% |
| hyb_t8 | 189,532 | 1.895% | 3.26% |
| hyb_t9 | 1,105,488 | 11.05% | 4.61% |
| hyb_t3 | 566,218 | 5.66% | 1.58% |
| hyb_t2 | 356,044 | 3.559% | 3.09% |
| hyb_t4 | 1,779,399 | 17.787% | 5.5% |
| Total: | 10,004,185 | 100.0% |