| Library | Read Count | Portion | Perfect |
| 2184_day_1_nw | 124,130 | 1.003% | 97.27% |
| pr8_e3_l_cb7-9 | 176,152 | 1.423% | 97.87% |
| 2430_day_8_ll-e | 133,278 | 1.076% | 98.75% |
| 2423_day_3_ul-b | 211,367 | 1.707% | 97.98% |
| 2420_day_3_ul-b | 101,856 | 0.823% | 98.75% |
| 2007_day_3_nw | 190,903 | 1.542% | 98.01% |
| 2431_day_8_ll-e | 72,526 | 0.586% | 96.16% |
| 2006_day_3_nw | 147,914 | 1.195% | 97.25% |
| extraction_control_l_cb7-9 | 15,732 | 0.127% | 96.74% |
| 2427_day_5_nw | 172,502 | 1.393% | 98.37% |
| 2425_day_5_ul-b | 228,029 | 1.842% | 98.16% |
| 2187_day_3_nw | 145,933 | 1.179% | 98.85% |
| 2016_day_8_ll-e | 141,061 | 1.139% | 98.73% |
| 2429_day_8_ul-b | 138,944 | 1.122% | 96.41% |
| 2006_day_3_ul-b | 110,979 | 0.896% | 97.79% |
| 2419_day_1_nw | 206,722 | 1.67% | 98.92% |
| 2425_day_5_ll-e | 121,667 | 0.983% | 97.49% |
| 2004_day_1_ll-e | 109,621 | 0.885% | 96.35% |
| 2012_day_5_nw | 174,571 | 1.41% | 98.31% |
| 2426_day_5_ll-e | 145,967 | 1.179% | 96.86% |
| 2015_day_8_ul-b | 106,446 | 0.86% | 97.95% |
| 2187_day_3_ul-b | 159,007 | 1.284% | 98.72% |
| 2181_day_1_ll-e | 73,918 | 0.597% | 98.55% |
| 2429_day_8_ll-e | 100,199 | 0.809% | 98.64% |
| 2017_day_14_ll-e | 133,742 | 1.08% | 96.62% |
| 2420_day_3_nw | 172,495 | 1.393% | 99.04% |
| 2186_day_3_nw | 117,772 | 0.951% | 96.12% |
| 2423_day_3_nw | 175,431 | 1.417% | 97.81% |
| 2422_day_3_ul-b | 58,684 | 0.474% | 97.26% |
| 2185_day_3_ll-e | 108,712 | 0.878% | 96.82% |
| 2002_day_1_ul-b | 141,606 | 1.144% | 97.72% |
| 2416_day_1_ll-e | 196,562 | 1.587% | 98.55% |
| 2424_day_5_ul-b | 85,297 | 0.689% | 96.58% |
| 2181_day_1_nw | 96,711 | 0.781% | 96.39% |
| negative_rt-pcr_control_l_cb7-9 | 129 | 0.001% | 48.06% |
| 2419_day_1_ll-e | 113,398 | 0.916% | 98.86% |
| 2432_day_14_nw | 98,785 | 0.798% | 98.82% |
| 2011_day_5_ll-e | 49,713 | 0.401% | 97.07% |
| 2417_day_1_ll-e | 157,483 | 1.272% | 98.77% |
| 2020_day_14_ul-b | 114,808 | 0.927% | 98.32% |
| 2417_day_1_nw | 121,250 | 0.979% | 97.59% |
| 2186_day_3_ll-e | 177,043 | 1.43% | 97.78% |
| 2188_day_3_nw | 132,667 | 1.071% | 98.74% |
| 2185_day_3_nw | 136,247 | 1.1% | 98.87% |
| 2430_day_8_ul-b | 64,982 | 0.525% | 98.42% |
| 2428_day_8_ll-e | 56,619 | 0.457% | 97.69% |
| 2435_day_14_nw | 107,893 | 0.871% | 98.19% |
| 2418_day_1_nw | 179,353 | 1.449% | 98.23% |
| 2416_day_1_nw | 210,400 | 1.699% | 97.66% |
| 2020_day_14_ll-e | 101,704 | 0.821% | 98.6% |
| ny238_plasmid_mix2_lp_cb7-9 | 71,972 | 0.581% | 97.77% |
| 2433_day_14_nw | 101,255 | 0.818% | 95.73% |
| 2007_day_3_ll-e | 153,878 | 1.243% | 98.04% |
| 2003_day_1_ul-b | 140,128 | 1.132% | 98.05% |
| 2426_day_5_nw | 143,592 | 1.16% | 97.44% |
| 2182_day_1_ul-b | 77,379 | 0.625% | 97.39% |
| 2183_day_1_nw | 146,136 | 1.18% | 96.76% |
| 2429_day_8_nw | 80,946 | 0.654% | 98.84% |
| pr8_positive_control_nw_cb7-9 | 102,194 | 0.825% | 96.41% |
| negative_extraction_control_nw_cb7-9 | 172,825 | 1.396% | 98.12% |
| 2422_day_3_ll-e | 164,722 | 1.33% | 98.67% |
| 2018_day_14_ll-e | 116,010 | 0.937% | 98.65% |
| 2008_day_3_nw | 178,376 | 1.441% | 98.14% |
| 2016_day_8_nw | 106,637 | 0.861% | 97.76% |
| 2421_day_3_nw | 206,829 | 1.67% | 98.8% |
| 2008_day_3_ll-e | 161,473 | 1.304% | 98.6% |
| 2182_day_1_nw | 149,126 | 1.204% | 98.66% |
| 2011_day_5_nw | 138,169 | 1.116% | 98.64% |
| 2424_day_5_nw | 99,558 | 0.804% | 97.51% |
| 2431_day_8_nw | 57,421 | 0.464% | 97.9% |
| 2005_day_3_ul-b | 47,507 | 0.384% | 95.22% |
| 2009_day_5_nw | 132,232 | 1.068% | 98.82% |
| 2181_day_1_ul-b | 197,364 | 1.594% | 98.53% |
| 2433_day_14_ll-e | 165,474 | 1.336% | 98.76% |
| 2005_day_3_ll-e | 220,286 | 1.779% | 98.87% |
| 2419_day_1_ul-b | 137,241 | 1.108% | 97.86% |
| 2434_day_14_ul-b | 93,268 | 0.753% | 97.75% |
| 2017_day_14_ul-b | 139,794 | 1.129% | 97.85% |
| 2010_day_5_nw | 171,917 | 1.388% | 98.09% |
| 2418_day_1_ul-b | 61,836 | 0.499% | 97.52% |
| 2002_day_1_ll-e | 43,533 | 0.352% | 97.58% |
| 2186_day_3_ul-b | 147,229 | 1.189% | 98.69% |
| 2185_day_3_ul-b | 157,320 | 1.271% | 98.92% |
| 2007_day_3_ul-b | 104,510 | 0.844% | 98.76% |
| ny238_positive_control_nw_cb7-9 | 211,827 | 1.711% | 98.78% |
| 2421_day_3_ul-b | 134,689 | 1.088% | 97.94% |
| 2427_day_5_ll-e | 131,706 | 1.064% | 98.38% |
| 2428_day_8_nw | 109,335 | 0.883% | 98.92% |
| 2425_day_5_nw | 114,958 | 0.928% | 97.16% |
| 2005_day_3_nw | 219,844 | 1.776% | 98.06% |
| 2422_day_3_nw | 134,754 | 1.088% | 98.89% |
| 2435_day_14_ll-e | 163,921 | 1.324% | 98.38% |
| viral_strain_aliquot_lp_cb7-9 | 222,899 | 1.8% | 98.03% |
| 2010_day_5_ll-e | 88,216 | 0.712% | 98.23% |
| rt-pcr_negative_control_nw_cb7-9 | 42,642 | 0.344% | 98.18% |
| library_prep_negative_control_lp_cb7-9 | 134 | 0.001% | 70.9% |
| Total: | 12,381,972 | 100.0% | |