nf-core/rnaseq v3.0
Run Name: evil_poincare
nf-core/rnaseq execution completed successfully!
The workflow was completed at 2021-08-25T22:32:34.430-04:00 (duration: 8h 7m 8s)
The command used to launch the workflow was as follows:
nextflow run .nextflow/assets/nf-core/rnaseq/main.nf -profile singularity -c HGVMYDRXY_merged.config -resume
Pipeline Configuration:
| runName | evil_poincare |
|---|---|
| containerEngine | singularity |
| launchDir | /scratch/cgsb/gresham/mk5636 |
| workDir | /scratch/mk5636/nextflow_work_dir |
| projectDir | /scratch/cgsb/gresham/mk5636/.nextflow/assets/nf-core/rnaseq |
| userName | mk5636 |
| profile | singularity |
| configFiles | /scratch/cgsb/gresham/mk5636/.nextflow/assets/nf-core/rnaseq/nextflow.config, /scratch/cgsb/gresham/mk5636/HGVMYDRXY_merged.config |
| input | /scratch/cgsb/gresham/mk5636/samplesheets/HGVMYDRXY_merged.csv |
| outdir | /scratch/cgsb/gresham/mk5636/HGVMYDRXY_merged/results |
mk5636@nyu.edu | |
| fasta | /scratch/work/cgsb/genomes/Public/Vertebrate_mammalian/Homo_sapiens/Ensembl/GRCh38.p10/Homo_sapiens.GRCh38.dna.toplevel.fa |
| gtf | /scratch/work/cgsb/genomes/Public/Vertebrate_mammalian/Homo_sapiens/Ensembl/GRCh38.p10/Homo_sapiens.GRCh38.88.gtf |
| star_index | /scratch/cgsb/gresham/mk5636/HKVNYDRXX_1/results/genome/index/star |
| tracedir | ./results/pipeline_info |
| Date Started | 2021-08-25T14:25:26.089-04:00 |
| Date Completed | 2021-08-25T22:32:34.430-04:00 |
| Pipeline script file path | /scratch/cgsb/gresham/mk5636/.nextflow/assets/nf-core/rnaseq/main.nf |
| Pipeline script hash ID | 4b892cc54e3b768dca93d19da30a907a |
| Nextflow Version | 20.11.0-edge |
| Nextflow Build | 5448 |
| Nextflow Compile Timestamp | 16-11-2020 08:23 UTC |
nf-core/rnaseq