[2023-07-10 13:56:51,555] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2023-07-10 13:56:51,555] multiqc [DEBUG ] No MultiQC config found: /home/mk5636/.multiqc_config.yaml [2023-07-10 13:56:51,555] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2023-07-10 13:56:51,558] multiqc [DEBUG ] Loading config settings from: /home/mk5636/nf-hpcpipe/test_new/bin/mqc_config.yaml [2023-07-10 13:56:51,558] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}} [2023-07-10 13:56:51,558] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/mk5636/nf-hpcpipe/test_new/bin/mqc_config.yaml . [2023-07-10 13:56:52,777] multiqc [WARNING] MultiQC Version v1.14 now available! [2023-07-10 13:56:52,777] multiqc [INFO ] This is MultiQC v1.9 [2023-07-10 13:56:52,777] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/mk5636/nf-hpcpipe/test_new/bin/mqc_config.yaml . [2023-07-10 13:56:52,777] multiqc [DEBUG ] Working dir : /scratch/mk5636/nf-pipeline-test/work/71/0bb18086695da488937878b3cf5c3e/2 [2023-07-10 13:56:52,777] multiqc [INFO ] Template : default [2023-07-10 13:56:52,777] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2023-07-10 13:56:52,777] multiqc [INFO ] Searching : /scratch/mk5636/nf-pipeline-test/work/71/0bb18086695da488937878b3cf5c3e/2 [2023-07-10 13:56:52,778] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2023-07-10 13:56:52,778] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-35282668/tmppiqyfym_ [2023-07-10 13:56:52,941] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2023-07-10 13:56:52,943] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2023-07-10 13:56:53,026] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_undetermined_fastqc.html [2023-07-10 13:56:53,028] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_undetermined_fastqc.html [2023-07-10 13:56:53,068] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_bulk_104_fastqc.html [2023-07-10 13:56:53,070] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_bulk_104_fastqc.html [2023-07-10 13:56:53,110] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_bulk_101_fastqc.html [2023-07-10 13:56:53,111] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_bulk_101_fastqc.html [2023-07-10 13:56:53,152] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_RL4_fastqc.html [2023-07-10 13:56:53,154] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_RL4_fastqc.html [2023-07-10 13:56:53,195] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_bulk_102_fastqc.html [2023-07-10 13:56:53,197] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_bulk_102_fastqc.html [2023-07-10 13:56:53,237] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_RL5_fastqc.html [2023-07-10 13:56:53,239] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_RL5_fastqc.html [2023-07-10 13:56:53,279] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_bulk_105_fastqc.html [2023-07-10 13:56:53,281] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_bulk_105_fastqc.html [2023-07-10 13:56:53,321] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_RL3_fastqc.html [2023-07-10 13:56:53,323] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_RL3_fastqc.html [2023-07-10 13:56:53,363] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_RL4_fastqc.html [2023-07-10 13:56:53,365] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_RL4_fastqc.html [2023-07-10 13:56:53,406] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_RL1_fastqc.html [2023-07-10 13:56:53,407] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_RL1_fastqc.html [2023-07-10 13:56:53,448] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_bulk_103_fastqc.html [2023-07-10 13:56:53,450] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_bulk_103_fastqc.html [2023-07-10 13:56:53,490] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_RL6_fastqc.html [2023-07-10 13:56:53,492] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_RL6_fastqc.html [2023-07-10 13:56:53,532] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_RL6_fastqc.html [2023-07-10 13:56:53,534] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_RL6_fastqc.html [2023-07-10 13:56:53,576] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_RL2_fastqc.html [2023-07-10 13:56:53,577] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_RL2_fastqc.html [2023-07-10 13:56:53,618] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_undetermined_fastqc.html [2023-07-10 13:56:53,620] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_undetermined_fastqc.html [2023-07-10 13:56:53,660] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_RL3_fastqc.html [2023-07-10 13:56:53,661] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_RL3_fastqc.html [2023-07-10 13:56:53,702] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_bulk_102_fastqc.html [2023-07-10 13:56:53,704] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_bulk_102_fastqc.html [2023-07-10 13:56:53,745] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_RL2_fastqc.html [2023-07-10 13:56:53,747] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_RL2_fastqc.html [2023-07-10 13:56:53,788] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_bulk_103_fastqc.html [2023-07-10 13:56:53,790] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_bulk_103_fastqc.html [2023-07-10 13:56:53,830] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_RL1_fastqc.html [2023-07-10 13:56:53,832] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_RL1_fastqc.html [2023-07-10 13:56:53,873] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_RL5_fastqc.html [2023-07-10 13:56:53,874] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_RL5_fastqc.html [2023-07-10 13:56:53,915] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_bulk_105_fastqc.html [2023-07-10 13:56:53,917] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n01_bulk_105_fastqc.html [2023-07-10 13:56:53,957] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_bulk_104_fastqc.html [2023-07-10 13:56:53,959] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_bulk_104_fastqc.html [2023-07-10 13:56:53,999] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_bulk_101_fastqc.html [2023-07-10 13:56:54,001] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMGL2DRX2_l02_n02_bulk_101_fastqc.html [2023-07-10 13:56:54,552] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2023-07-10 13:56:54,554] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2023-07-10 13:56:54,561] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2023-07-10 13:56:54,567] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 12 samples (table) [2023-07-10 13:56:54,577] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2023-07-10 13:56:54,582] multiqc [DEBUG ] No samples found: conpair [2023-07-10 13:56:54,587] multiqc [DEBUG ] No samples found: peddy [2023-07-10 13:56:54,593] multiqc [DEBUG ] No samples found: somalier [2023-07-10 13:56:54,598] multiqc [DEBUG ] No samples found: methylQA [2023-07-10 13:56:54,605] multiqc [DEBUG ] No samples found: mosdepth [2023-07-10 13:56:54,609] multiqc [DEBUG ] No samples found: phantompeakqualtools [2023-07-10 13:56:54,615] multiqc [DEBUG ] No samples found: qualimap [2023-07-10 13:56:54,620] multiqc [DEBUG ] No samples found: preseq [2023-07-10 13:56:54,624] multiqc [DEBUG ] No samples found: quast [2023-07-10 13:56:54,629] multiqc [DEBUG ] No samples found: qorts [2023-07-10 13:56:54,633] multiqc [DEBUG ] No samples found: rna_seqc [2023-07-10 13:56:54,638] multiqc [DEBUG ] No samples found: rockhopper [2023-07-10 13:56:54,642] multiqc [DEBUG ] No samples found: rsem [2023-07-10 13:56:54,653] multiqc [DEBUG ] No samples found: rseqc [2023-07-10 13:56:54,657] multiqc [DEBUG ] No samples found: busco [2023-07-10 13:56:54,662] multiqc [DEBUG ] No samples found: goleft_indexcov [2023-07-10 13:56:54,666] multiqc [DEBUG ] No samples found: disambiguate [2023-07-10 13:56:54,671] multiqc [DEBUG ] No samples found: supernova [2023-07-10 13:56:54,683] multiqc [DEBUG ] No samples found: deeptools [2023-07-10 13:56:54,688] multiqc [DEBUG ] No samples found: sargasso [2023-07-10 13:56:54,694] multiqc [DEBUG ] No samples found: verifybamid [2023-07-10 13:56:54,699] multiqc [DEBUG ] No samples found: mirtrace [2023-07-10 13:56:54,703] multiqc [DEBUG ] No samples found: happy [2023-07-10 13:56:54,708] multiqc [DEBUG ] No samples found: mirtop [2023-07-10 13:56:54,713] multiqc [DEBUG ] No samples found: homer [2023-07-10 13:56:54,723] multiqc [DEBUG ] No samples found: macs2 [2023-07-10 13:56:54,727] multiqc [DEBUG ] No samples found: theta2 [2023-07-10 13:56:54,731] multiqc [DEBUG ] No samples found: snpeff [2023-07-10 13:56:54,738] multiqc [DEBUG ] No samples found: gatk [2023-07-10 13:56:54,742] multiqc [DEBUG ] No samples found: htseq [2023-07-10 13:56:54,747] multiqc [DEBUG ] No samples found: bcftools [2023-07-10 13:56:54,751] multiqc [DEBUG ] No samples found: featureCounts [2023-07-10 13:56:54,757] multiqc [DEBUG ] No samples found: fgbio [2023-07-10 13:56:54,769] multiqc [DEBUG ] No samples found: dragen [2023-07-10 13:56:54,773] multiqc [DEBUG ] No samples found: dedup [2023-07-10 13:56:54,778] multiqc [DEBUG ] No samples found: damageprofiler [2023-07-10 13:56:54,800] multiqc [DEBUG ] No samples found: biobambam2 [2023-07-10 13:56:54,806] multiqc [DEBUG ] No samples found: mtnucratio [2023-07-10 13:56:54,808] multiqc [DEBUG ] No samples found: picard [2023-07-10 13:56:54,813] multiqc [DEBUG ] No samples found: prokka [2023-07-10 13:56:54,817] multiqc [DEBUG ] No samples found: samblaster [2023-07-10 13:56:54,825] multiqc [DEBUG ] No samples found: samtools [2023-07-10 13:56:54,829] multiqc [DEBUG ] No samples found: sexdeterrmine [2023-07-10 13:56:54,834] multiqc [DEBUG ] No samples found: bamtools [2023-07-10 13:56:54,838] multiqc [DEBUG ] No samples found: jellyfish [2023-07-10 13:56:54,844] multiqc [DEBUG ] No samples found: vcftools [2023-07-10 13:56:54,849] multiqc [DEBUG ] No samples found: longranger [2023-07-10 13:56:54,859] multiqc [DEBUG ] No samples found: stacks [2023-07-10 13:56:54,864] multiqc [DEBUG ] No samples found: varscan2 [2023-07-10 13:56:54,878] multiqc [DEBUG ] No samples found: bbmap [2023-07-10 13:56:54,882] multiqc [DEBUG ] No samples found: bismark [2023-07-10 13:56:54,887] multiqc [DEBUG ] No samples found: biscuit [2023-07-10 13:56:54,891] multiqc [DEBUG ] No samples found: hicexplorer [2023-07-10 13:56:54,895] multiqc [DEBUG ] No samples found: hicup [2023-07-10 13:56:54,900] multiqc [DEBUG ] No samples found: hicpro [2023-07-10 13:56:54,904] multiqc [DEBUG ] No samples found: salmon [2023-07-10 13:56:54,908] multiqc [DEBUG ] No samples found: kallisto [2023-07-10 13:56:54,913] multiqc [DEBUG ] No samples found: slamdunk [2023-07-10 13:56:54,917] multiqc [DEBUG ] No samples found: star [2023-07-10 13:56:54,923] multiqc [DEBUG ] No samples found: hisat2 [2023-07-10 13:56:54,927] multiqc [DEBUG ] No samples found: tophat [2023-07-10 13:56:54,931] multiqc [DEBUG ] No samples found: bowtie2 [2023-07-10 13:56:54,936] multiqc [DEBUG ] No samples found: bowtie1 [2023-07-10 13:56:54,940] multiqc [DEBUG ] No samples found: snpsplit [2023-07-10 13:56:54,944] multiqc [DEBUG ] No samples found: kat [2023-07-10 13:56:54,948] multiqc [DEBUG ] No samples found: leehom [2023-07-10 13:56:54,953] multiqc [DEBUG ] No samples found: adapterRemoval [2023-07-10 13:56:54,958] multiqc [DEBUG ] No samples found: clipandmerge [2023-07-10 13:56:54,964] multiqc [DEBUG ] No samples found: cutadapt [2023-07-10 13:56:54,968] multiqc [DEBUG ] No samples found: flexbar [2023-07-10 13:56:54,972] multiqc [DEBUG ] No samples found: kaiju [2023-07-10 13:56:54,977] multiqc [DEBUG ] No samples found: kraken [2023-07-10 13:56:54,981] multiqc [DEBUG ] No samples found: malt [2023-07-10 13:56:54,985] multiqc [DEBUG ] No samples found: trimmomatic [2023-07-10 13:56:54,990] multiqc [DEBUG ] No samples found: sickle [2023-07-10 13:56:54,994] multiqc [DEBUG ] No samples found: skewer [2023-07-10 13:56:54,998] multiqc [DEBUG ] No samples found: sortmerna [2023-07-10 13:56:55,002] multiqc [DEBUG ] No samples found: biobloomtools [2023-07-10 13:56:55,006] multiqc [DEBUG ] No samples found: fastq_screen [2023-07-10 13:56:55,012] multiqc [DEBUG ] No samples found: afterqc [2023-07-10 13:56:55,016] multiqc [DEBUG ] No samples found: fastp [2023-07-10 13:56:55,809] multiqc.modules.fastqc.fastqc [INFO ] Found 24 reports [2023-07-10 13:56:56,154] multiqc [DEBUG ] No samples found: pycoqc [2023-07-10 13:56:56,158] multiqc [DEBUG ] No samples found: minionqc [2023-07-10 13:56:56,163] multiqc [DEBUG ] No samples found: multivcfanalyzer [2023-07-10 13:56:56,167] multiqc [DEBUG ] No samples found: clusterflow [2023-07-10 13:56:56,172] multiqc [DEBUG ] No samples found: bcl2fastq [2023-07-10 13:56:56,176] multiqc [DEBUG ] No samples found: interop [2023-07-10 13:56:56,181] multiqc [DEBUG ] No samples found: ivar [2023-07-10 13:56:56,185] multiqc [DEBUG ] No samples found: flash [2023-07-10 13:56:56,189] multiqc [DEBUG ] No samples found: seqyclean [2023-07-10 13:56:56,189] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found. [2023-07-10 13:56:56,189] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found. [2023-07-10 13:56:56,189] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found. [2023-07-10 13:56:56,189] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'. [2023-07-10 13:56:56,189] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'. [2023-07-10 13:56:56,189] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'. [2023-07-10 13:56:56,189] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'. [2023-07-10 13:56:56,189] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'. [2023-07-10 13:56:56,189] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'. [2023-07-10 13:56:56,189] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'. [2023-07-10 13:56:56,189] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2023-07-10 13:56:56,189] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'. [2023-07-10 13:56:56,189] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'. [2023-07-10 13:56:56,190] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'. [2023-07-10 13:56:56,190] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'. [2023-07-10 13:56:56,190] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'. [2023-07-10 13:56:56,190] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'. [2023-07-10 13:56:56,190] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'. [2023-07-10 13:56:56,190] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'. [2023-07-10 13:56:56,190] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'. [2023-07-10 13:56:56,190] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'. [2023-07-10 13:56:56,190] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'. [2023-07-10 13:56:56,190] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'. [2023-07-10 13:56:56,190] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'. [2023-07-10 13:56:56,190] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2023-07-10 13:56:56,190] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'. [2023-07-10 13:56:56,190] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'. [2023-07-10 13:56:56,190] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'. [2023-07-10 13:56:56,190] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'. [2023-07-10 13:56:56,190] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'. [2023-07-10 13:56:56,219] multiqc [INFO ] Compressing plot data [2023-07-10 13:56:56,675] multiqc [INFO ] Report : multiqc_report.html [2023-07-10 13:56:56,676] multiqc [INFO ] Data : multiqc_data [2023-07-10 13:56:56,676] multiqc [DEBUG ] Moving data file from '/state/partition1/job-35282668/tmppiqyfym_/multiqc_data' to '/scratch/mk5636/nf-pipeline-test/work/71/0bb18086695da488937878b3cf5c3e/2/multiqc_data' [2023-07-10 13:56:56,797] multiqc [INFO ] MultiQC complete