FastQCFastQC Report
Mon 16 Sep 2024
HFHGFDRX5_n01_YTW257_3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHFHGFDRX5_n01_YTW257_3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14327759
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACTATC1102803676.96972010765954No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATCGGAAGAGCAGATCG2776091.9375605075434337No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGATCGGA2702581.886254507770545No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATCGGAAGAGCACAGAT2474691.7271996269618994No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTAGATCGGAAGAGC1460191.0191335574530531No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACAGAT1433201.000295998836943No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACTAGA1269990.8863842559049185No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATCGGAAGAGATCGGAA1024060.714738431878984No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGAGATCG820520.5726785326302599No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACAGATCGGAAG687130.4795795350829114No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGAGCTGAGTA648900.45289706506090727No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATAGATCGGAAGAGCAC646680.4513476252636578No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACTATA495280.34567862287465895No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCGGACTATC379320.264744821573283No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGGCTATC318490.22228877523693694No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACTACC299810.20925114667269318No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTAGATCGGAAGAG273590.19095100636463805No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGAGATCGGAA259020.1807819352628698No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACCATC237310.16562953075913686No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACTGTC228360.1593829153603156No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACTAAG224130.1564306043952861No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATCGGAAGAGAGATCGG215590.15047014679685777No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACACAGACTATC204020.14239491325894021No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATCGGAAGAGCAAGATC198010.13820025867269264No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATCGGAAGAGCACACGT172750.1205701463850697No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTGCGCAGACTATC158670.11074306875206374No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCATTTTTACGCAGACTATC157340.10981480076542327No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTAGATCGGAAGAGCA146310.10211645798899885No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)