FastQCFastQC Report
Mon 28 Oct 2024
HFHGFDRX5_n02_YTW272_3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHFHGFDRX5_n02_YTW272_3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19875632
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTAACCCTAGAAAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAA203323010.229762756726428No Hit
GAAAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAAATATTGCTTA9793294.927284827974275No Hit
CTCCCCATTTCTCTAGATTAACCCTAGAAAGATAGTCTGCGTAAAATTGA7647093.8474701081203357No Hit
TGAAACTCAAACTGGGAGGAAGATAAGAAAAGCTTTAACCCTAGAAAGAT6458313.2493608253563964No Hit
GCTGTGAATGCTGCGGGCATTCTCCTCCGCAGAGCTCTTTCTTAACCCTA3190311.6051363800658012No Hit
CCACACCTCTACCGGCATGCCGAGCAAATGCCTGCAAATCGCTCCCCATT2730631.3738581998298218No Hit
AGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAAATATTGCTTACGA2304711.1595656429943964No Hit
TAGAAAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAAATATTGCT2256681.1354003736837148No Hit
GCGTAAAATTGACGCATGCATTCTTGAAATATTGCTTACGACAGATCGGA2199991.1068780102187443No Hit
CCTAGAAAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAAATATTG2076981.0449881543389412No Hit
TAGTCTGCGTAAAATTGACGCATGCATTCTTGAAATATTGCTTACGACAG2022631.0176431119272082No Hit
AGTCTGCGTAAAATTGACGCATGCATTCTTGAAATATTGCTTACGACAGA1847860.9297113168527169No Hit
GTCTGCGTAAAATTGACGCATGCATTCTTGAAATATTGCTTACGACAGAT1740690.8757910188717521No Hit
AGAAAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAAATATTGCTT1690620.8505993671044021No Hit
ATTGACGCATGCATTCTTGAAATATTGCTTACGACAGATCGGAAGAGCGT1544040.7768507688208355No Hit
TCTGCGTAAAATTGACGCATGCATTCTTGAAATATTGCTTACGACAGATC1452460.7307742465749014No Hit
CTGCGTAAAATTGACGCATGCATTCTTGAAATATTGCTTACGACAGATCG1400540.7046518067953764No Hit
TTAACCCTAGAAAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAAA1355140.681809765847949No Hit
CTAGAAAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAAATATTGC1169390.5883536181390358No Hit
AAAATTGACGCATGCATTCTTGAAATATTGCTTACGACAGATCGGAAGAG1143300.5752269915240934No Hit
CCCTAGAAAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAAATATT1060060.5333465622627749No Hit
ACCCTAGAAAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAAATAT901120.45337929380056946No Hit
TGCGTAAAATTGACGCATGCATTCTTGAAATATTGCTTACGACAGATCGG867800.4366150470083165No Hit
TAACCCTAGAAAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAAAT818060.4115894276971922No Hit
ATAGTCTGCGTAAAATTGACGCATGCATTCTTGAAATATTGCTTACGACA759550.3821513700797036No Hit
AAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAAATATTGCTTACG737740.3711781341091443No Hit
GATAGTCTGCGTAAAATTGACGCATGCATTCTTGAAATATTGCTTACGAC719460.3619809422915457No Hit
ATTGAAGATTGTAAATCTAAATCCAAATTATGAATGATTTTCTTGGCCTC622650.3132730571787604No Hit
AAATTGACGCATGCATTCTTGAAATATTGCTTACGACAGATCGGAAGAGC596670.3002017747158933No Hit
GTAAAATTGACGCATGCATTCTTGAAATATTGCTTACGACAGATCGGAAG595980.2998546159437848No Hit
AATTGACGCATGCATTCTTGAAATATTGCTTACGACAGATCGGAAGAGCG568520.2860387030711778No Hit
CGTAAAATTGACGCATGCATTCTTGAAATATTGCTTACGACAGATCGGAA506560.2548648515931468No Hit
AACCCTAGAAAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAAATA497090.25010022322812175No Hit
TTTAACCCTAGAAAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAA461170.23202784193227166No Hit
AAAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAAATATTGCTTAC443090.222931275845719No Hit
TAAAATTGACGCATGCATTCTTGAAATATTGCTTACGACAGATCGGAAGA308270.15509947054765352No Hit
CTTAACCCTAGAAAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAA248780.12516834684803985No Hit
TTCTCTAGATTAACCCTAGAAAGATAGTCTGCGTAAAATTGACGCATGCA208160.10473126087261024No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)