FastQCFastQC Report
Mon 28 Oct 2024
HFHGFDRX5_n01_YTW268_3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHFHGFDRX5_n01_YTW268_3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4984303
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACTATC373891275.0137381294837No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGATCGGA1621683.2535742710665865No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTAGATCGGAAGAGC919131.8440492080838584No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACTAGA551941.107356434791384No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAAGATCGGAAGAGCACAC412600.8277987915261171No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACAGAT364940.7321786015015539No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACAGATCGGAAG317230.6364580965483038No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATAGATCGGAAGAGCAC298690.5992613209911195No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATATCGGAAGAGCACAC195930.39309407955334974No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTAGATCGGAAGAGCA157110.31520956892066954No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATCGGAAGAGATCGGAA152550.3060608474244042No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGAGATCG150180.30130591980463467No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGAGATCGGAA139110.2790961945933062No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCGGACTATC128530.2578695556831116No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGGCTATC122020.2448085519680485No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACTACC109980.22065271714018989No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCATTTTTACGCAGACTATC108540.21776364719400085No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACTATA99320.19926557434409584No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACCATC95190.1909795612345397No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTCTACGCAGACTATC85630.1717993468695623No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACTGTC80080.16066438978529193No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTAGATCGGAAGAG76810.15410379344915429No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACACAGACTATC75950.1523783766757358No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTATGCAGACTATC66760.1339404927830431No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTGCGCAGACTATC65270.13095110790816689No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTACGCAGACTATCT60280.12093967802519229No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)