FastQCFastQC Report
Mon 8 Jan 2024
HNTFHDMXY_n02_MTH-010_r2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNTFHDMXY_n02_MTH-010_r2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAACTGTGAACCAACATTTTCTTTTAAAAGTTATGAATCGAGTATTTAAA10.8No Hit
AGATCGCCAAGTCGGACCCTCCCACGCTGCTCACGCCCTCTAAGTGGTCT10.8No Hit
CAGTTCTCCAAGGATGTCGTTGATTTGCTGCGTCACCAACCCCATTTCCG10.8No Hit
GATCCCTGGAGAGCTTCCTGTGTGACCCCTACTCGGCGGAGAGTCCAACC10.8No Hit
CTGGTATTCCTGCTGAGTGTCAAAGTGGCCAGAAAACAGTTAAACCAAAA10.8No Hit
GTGGATATTAAATGGGTAGATGGTGCAAAGCCTTTGTTGAAGATTAAAAG10.8No Hit
GTTTCTTGGTGACATCTAATATAGAACTTTTTTATTGTGTTTATGTTCTG10.8No Hit
GTGTCGTCGGCGAGCCGCGACCGGGACCTGGCGCGCACCATGATCGTGGC10.8No Hit
CTGAAAACCCACACTCGAATTCACTCTGGAGAGAAGCCCTACAAATGCGA10.8No Hit
GCGCTGCCATCATGAGTGAAATTCGTAAGGACACCTTGAAGGCCATTCTG10.8No Hit
TCTTAAGCTAGATGATTAGAATGTGAAAAAGATTTTACAAATGTAAAACT10.8No Hit
CTTCAACACCATCATTTCTACGAGGTTCTAGGTCTTTTGTGAACAAATTA10.8No Hit
TAAATCAGGGCCAGTCTTGGTGGCTGACACCTGGAATTCCAGAACTTTGG10.8No Hit
TTTCAGTAGAGGTGGGGTTTTGCTATGTTGGCCAGGCTGGTCTTGAACTC10.8No Hit
CCACCATCGAGGCGGTGAAGCGCAAGATCCAGGTTCTGCAGCAGCAGGCA10.8No Hit
CTCTATGTCTGCAGCTTTCTCTCCCACCATAAGGAAATCTGTGATTTCTA10.8No Hit
GAACTGCTAGGTCACTCATGGTCAGGTTGAGCTCAGCAATCAGCACACAT10.8No Hit
CGTATTACAGCGTTGCTCACCAAATTTGCAAAGACATTCCAATTCCTTGG10.8No Hit
GGGCCTAATACAGGGAAAGTGCACTGTGTATGAGCTATGAAGGCACAATG10.8No Hit
GACATTCCAGAGAAATGGCCAGACTTGCCCCTACCCTTTTGCCCCTGGTG10.8No Hit
TCGGCTCTTTCCAATTTGGCTACAACACTGGGGTCATCAATGCTCCTGAG10.8No Hit
GGGCCCAGGCCGGGCCCAGCCTGGTGGAGCGTCCAGGTCTGGGTGCGAAG10.8No Hit
ACAAACCCTGTGTAACTGTCCCAAGTTAATCTAAGTGAACAGAACTATCT10.8No Hit
AAAACAGTCAAACAAACCCTCTTAAAAAACAATACACACTTATTAATACA10.8No Hit
GGAGGGAGAGAGAGGCAGTGTACTTGCCCCCATCTCCTGGAGGGAGGTGC10.8No Hit
GGAATCTACCATTTTAAAGTTAATTGCTTGTCAAGCTATAACCACAAAAA10.8No Hit
TCAAAAAACAGCAACTTAATAGAGTGTATAAATGCTCATTTTGTGATAGT10.8No Hit
TTTGTCTTTAAATGGTTTCTGACAAGTTTTCTTTTCTTAGTATTTTCTAC10.8No Hit
GCCATACTGAACCTCATTCTAAACTGGTGCTGTGGATAGTCTTTCCCTCT10.8No Hit
CTTCGTATCCTTTGCACCAAATTGTTATTTTAAAATATAGGTCACCCTAC10.8No Hit
AAACATGTTCACCCTTTACAGTACTCCCTGCCTTAATGAATGAATACAGA10.8No Hit
GGGAAGGAGAAGCTCCTGAAATGAACGTTCTGCAAACAGAAGGCTGAGGG10.8No Hit
TGCTAAACTAGAAGAAGAGAAATTATCCCAAAAGAAAGAATCTGAAAAGA10.8No Hit
TATTTCCTTGGCTTGGAGAAAGTCTTAACCCTTGATCACCCAGATGCAGT10.8No Hit
CGAGAAGCTACAAGACAAAATAGGTGAGTTTGTTTGACCTGAGAATTATG10.8No Hit
AGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGAC10.8No Hit
TCATTTAGGTCCCAGCCCAACTGCCATCCCTTCTGGGGACTGTCCTCGTC10.8No Hit
CCTGACTTAAGTAGGGCAGTAGGAATGCTTCATTTTCCTAATGCAAGTTC10.8No Hit
TCACCTCTGTCTCCATGCAGCAAACTCAGAGGCTCAGCCCGCATTCCACT10.8No Hit
ATCGAAAGGAGCAAGAGCAAGATCACCGTGACATCCGAGGTGCCTTTCTC10.8No Hit
CCACCATGCCCAGCTAATTGTTTTAATTTTTTTTTTTTTTGAGACAAGAT10.8No Hit
CGATGGTCATGATGGTGGTGACCCACGTGACTGGAAAGTGTCCACACCTT10.8No Hit
CTGTCTTTCAGAAGACCTGGTGGGGCAAGTCCGTGGGCATCATGTTGACC10.8No Hit
GTGGCTCAGGTGTGAGCCACCGTGCCTGGCTTTTCTCCACTATCTTGAAA10.8No Hit
GGCTCATTCATTTCTCTAACAGCAGTAATATTAATAATTTTCATGATTTG10.8No Hit
TTTTTTCCTGAACACCAGTTAAATTCTTTTCATCATATCACAGAGAATTG10.8No Hit
GGGATTTAAATTCACGGTGGCTGAGTCTTGTGACAGGATCAAAGACGAAT10.8No Hit
GTAAGATTAGGGGATGAGTTTTACTCATTTCCAGATGCTAGAGGCCACTG10.8No Hit
AGTGGATTCTCCAGGACAAACCTGTGTTCATGGAGGAGACAGATAGAAAA10.8No Hit
CCTGCGTCAGCCCTTAATGTGTGCACAGCTCAGAGCCAATATTTGGAACT10.8No Hit
CTCTAAACAGACCTCCGGCTGCACCTAACCAGCTTCGACTTCAACTACAG10.8No Hit
CAAACTCAATTTTGCATAGAAAGGTGTATTTTGAATAGTTCCCATGTTGT10.8No Hit
ATTGTGTATTGCAGGAGAGGAGTATAGTATACAATATAACCCAAGACATA10.8No Hit
GTGAAAAAGATAAGAAGGAAAAGAAACCAACTGTCAGTGTATTTTCAATG10.8No Hit
GGTAGTTGCACGGTGAGACTGTGAGGCAGCAGTTGGCAGTGCCTTCAGAT10.8No Hit
GCAGAAAATGGTAAACATGAGGGTGCTCTTGTGACTTAATTTTTGTTCAA10.8No Hit
AATCAAAATACACACAGAGGCTGGGCACAGTGGCTCACGCCTGTAATCCC10.8No Hit
TCTTACATTGGTCACTGGGCACCATACTTTCCCTGTGGCTCCTGTCCCAG10.8No Hit
CCTCTCTCGCTTTCTTTCTTACACAGAAACATACACATACCGAGAAACCT10.8No Hit
CATCCTTTGATTATTTAACAACTACATGCAGCTTGCCAGGGGGATATCAC10.8No Hit
TTCTTTCTGATAGATACTTACAAGGAGAAAAAGCAAAACAAAGTTAGCTA10.8No Hit
AGGGAGAGCAGCAGCCATGTCAGCTACACGCTCAAATGTGCAGATGATTA10.8No Hit
CTCGAACTGGGTGGATCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTG10.8No Hit
GGCCTGCTCACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTA10.8No Hit
GCACTAAACAACGAACTGCATCAGGAATCTGATTTTCAGGAACGACTGAA10.8No Hit
ATGTGGGACGTTTCTGCATTTGGACTGAAAGTGCTTTCCGGAAGTTAGAT10.8No Hit
GAAAACTCCCCAGAGATGTGCCGGAAGTGTAGCAGGTGCCCTAGTGGGGA10.8No Hit
GGGGGGTGGGGGGGTGGGGGGGGGGGGGGGGCGGGGGGCGGGGGGGGGGG10.8No Hit
AACATCCTCAACCAGATAAAGCTTATCAATAAAAAACCCACAGCTAGCAT10.8No Hit
ACCAATAAGAAAAAAATCGTCCAACGAATTGGAATTAAAAATCTGACAAC10.8No Hit
AATGAGAGCCATTATAAAGTACAAATTCTACTGAGTTGGATGACATTTGA10.8No Hit
AGAGAAGTTGTGGAGAAATGGGGGGCTGATTCTGCTCAGATTCATCAGGA10.8No Hit
GAGCCCTTATGACCTAACCATCTCCCAAAGGCCCTACCTCCTAGTACCAT10.8No Hit
GTCCCTTCATCTCTGCTGTTTGTTCAATGTAAATTAGCCATCATCCTCCC10.8No Hit
ACTGAGGGAACCAAACCAGAGACGCGCTGAACAGAGAGAATCAGGCTCAA10.8No Hit
CAGCTATTAACTATTGATCTGTCTATTCACGTGCCAGTTCCTAATGGTTT10.8No Hit
CCTGGGGACCCTGCGCGGCTACTACAACCAGAGCGAGGCCGGTTCTCACA10.8No Hit
TCTTAATTAAATCTTATTTACCCAATTTCGTTGAATGAAGGTTTATGCTA10.8No Hit
CAGGAATGAAACATATTTAGATAAGAAGTGGCTTCCCCTGGACCGTGATG10.8No Hit
CAACATCCTAAGTTACAGAACTAAACATGCTCTGCCTCTGCTTATAAACC10.8No Hit
AAAAAACATCTGTGGGTTTTTAATATGGATTAAACATCTGTGGGTTTTTA10.8No Hit
GAAGGCAGTGTTTGTAGTTTACAAAATCAATTGGCAGAAAATGCAAAGGC10.8No Hit
TCTGGATCTGAAGACTGAAACACCAGCTTCCAGAAAAATAGAAATCTGGG10.8No Hit
CGGTAACTAAAAAAGCCTGTCTGCCAAATCCAGTGGAAACAAGTGCATAG10.8No Hit
GGGCACATAGCGGATCGAGACGCCATTGTAGAAGCCCTGGAAACCAACAG10.8No Hit
GGAGCACGTGAAACAGCTAGAGAAAGCGGTTTCAGGCAAGGAGCCGAGAT10.8No Hit
AGCGACAATGAGTCAGATATCGAAGATGAAGACTTAAAGTTAGAGCTGCG10.8No Hit
GTCAAAGGTGACTGGGTGACACAAACAGCTCAGGTAATTCAGGTCCTGCC10.8No Hit
GCTAACCAAAGCCCATGTGTTCGAGTGTAATTTAGAGAGCAGCGTGGAGA10.8No Hit
GTGCAATATTGGAAGCCATTTCTACTAATTTTATTTCACTTTTAAATTTA10.8No Hit
GGGATACCAGAAAGAAGCAGAAGACTTGAATCTCAAATGTAATAAAAGAT10.8No Hit
TTTCAGATTATTCTCAAAGAACACAGTAGCACCTAAATCTGTTTTCAATT10.8No Hit
ATCACCTCCAGCGCCAAAGTGGACATGACGTTCGAGGAGGAGGCACAGCT10.8No Hit
CTGGGGCTGGCCGGGCTGGTCCTCATCTCCCTGGGCGCGCTGGTCACTTT10.8No Hit
GGGAGAAAATTTTTGCAATCTCTCCATCTGACAAAGGACTAATATCCAGA10.8No Hit
GAGAAGCTAAAGAGAAAAACAGAGAAACTTGGTACTTGTCTTGGGCCTTA10.8No Hit
CCTGGGGCTCATGGATTGGCCCCGACCACGACAAGTTCAGTGCCATGAAG10.8No Hit
GGCTTGGCAGGGGGTTTTGGCCTAGGCCTGATGGCAAGCCTACCTTTCTC10.8No Hit
CTTGAACTCCTGAGTTCGTTATCTGCCCGCCTTGGCCTCCGAAAGTGCTG10.8No Hit
CAACCAAGCAACTGTAGAGCCCTCTTCATGCCTGTGGCTTTGCATATTTT10.8No Hit
CAGGCTTGAGTACAACGGTACGGTTTCCGCTCATGGCAACCTCTGCCTCC10.8No Hit
GTTAGAAGTGTCAGAAACTCTCCTTTACCCCCCACTTAGTCTTTGGCATT10.8No Hit
TTGAAGAAGGGCAGCCTCCTGCCTACTAGCCCCAGACTGGTCAATGAGAG10.8No Hit
AGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCC10.8No Hit
GAGCATTACTTAATGGAGGAACTAGTGTAACAGAAAAGTTGGCACAGCTG10.8No Hit
GCTTTTACAGGATTACATGGCCGAAGGAGAAGAGAGTACTGGCAGGTCTG10.8No Hit
ATTATAATGAGCAAAGGGTCAGTCTGAGGACAAGGAAAATCAAAATGTGC10.8No Hit
ATTAATGATCAGACAAAGTATAAACCCTGAAAATAAACAAAAATTTTTAA10.8No Hit
CCACCATCAAACCATTTCCAGTACAGAAAAACACTTTCAGGGGATTTATT10.8No Hit
AAAATAGTGTAAAACTTAGGGGAAAAACTTAGGGGAAAAACGAGTTATGG10.8No Hit
GGTCCTATAGGAGAGACTTGGAGTGGCACACTTGGGGGATGTTCTCCCGA10.8No Hit
GGGAAACAGAATGAAGACCTCCAGGTGAAGGTACAAGACATTACAATGCA10.8No Hit
GCGCCGAGTGCCTGAAGTTCGAAAAGGGCCCCTTTGGGAAGAACTGCAGC10.8No Hit
AACTCCACAGGAAGCCTCTTTTATAAGAGGAGCCCTCGTGACCTAGTCCG10.8No Hit
AAAAGAGAGTCAGCAAAGGGTGGTGGATTATCATTAGTTCTTACAGGTTT10.8No Hit
CAAAAGTATTGGTGCGGAGGAGGCCATGGAACATCTTAATTGATACTGAA10.8No Hit
CTGAGAACTTACGCAGATCAGCCGATTGATGCTGATGTAACAGTTATAGG10.8No Hit
GCTGGGTCTGTCAGCTCTCGGAATAGGGACAGTCCTTACTGGTGCCCCAA10.8No Hit
CTTCTGAGAGGCCCCTTGCCCTCCTGTGGCCCCTCTCTGCTGCTTCTGTG10.8No Hit
GTTTTAGAAATGACAGTAAGCTGCTCTAGGTTTTTTTTTTTTTACAGCAT10.8No Hit
CGGAAAAAAATATAAAAACTAACGTCTTAATTAAAAATTTTTATAAAAAA10.8No Hit
CTTTTCTGTGTTTGGTCGATATTAATAATGGCAAAATTTTTGCCTATCTA10.8No Hit
CTCCAGACAAGGGTTCCATGGCTGCTACCCCGAGGCTGCACAGTGTGAGC10.8No Hit
GTTGCTAAGAAAATTAAAACACAAGAAAAAGCTCCAGTGAAAAAAATAAA10.8No Hit
GAAGGCCCAGAGGGAAAGTTGAAAGGTCCCAAATTCAAAATGCCTGAGAT10.8No Hit

[OK]Adapter Content

Adapter graph