FastQCFastQC Report
Fri 29 Sep 2023
HL553DRX3_n02_S3_D7_452_TCell.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHL553DRX3_n02_S3_D7_452_TCell.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8
Sequences flagged as poor quality0
Sequence length90
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTACTCTTTAAACTCACTTTCCCCTCAGTCTCCCTAATGGTAGTACT112.5No Hit
ATATAAATACAAACAAGACCCTAAATTCACAACAACAAAATAAGAAACAA112.5No Hit
GTTATAATTTTTCATCTTTCCCTTGCGGTACTATATCTATTGCGCCAGGT112.5No Hit
CCCATTCTCTGGCTTCCCTATGGGCATGGGTGGCTTCACCAACGTGAACT112.5No Hit
CTAACAACCTATTCCAACTGTTCATCGGCTGAGAGGGCGTAGGAATTATA112.5No Hit
TTTTCAATTAAAGAAGAGGCCATGACCAAAGACACCCAAATAACAAAGTA112.5No Hit
CGGTGTGGTGCATTTGTCTGCCGGTTGTGGGAGGCCCATATAGAAAGATA112.5No Hit
AAAACAATAAACAACACCTTCAAAAGAAACACATCAAAATAAGAAAACAC112.5No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)