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        If you use plots from MultiQC in a publication or presentation, please cite:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        About MultiQC

        This report was generated using MultiQC, version 1.9

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/ewels/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2023-07-22, 07:22 based on data in: /vast/gencore/GENEFLOW/work/c9/fff724d11ef00de3e55a5a09825aef/merged

        Demultiplexing Report


        Total Read Count: Total number of PF (Passing Filter) reads in this library.
        Portion: The proportion of reads that represent the individual library in the entire Library Pool.

        Showing 13/13 rows and 2/2 columns.
        LibraryTotal Read CountPortion (%)
        undetermined_library
        15087743
        2.7
        Rep1_IgG
        41550862
        7.5
        Rep1_H3k4me3
        14927116
        2.7
        Rep1_SRF
        56692098
        10.2
        Rep1_BPTF
        54853763
        9.9
        Rep2_IgG
        43201073
        7.8
        Rep2_H3k4me3
        12348191
        2.2
        Rep2_SRF
        77229498
        14.0
        Rep2_BPTF
        65599818
        11.8
        Rep3_IgG
        36944045
        6.7
        Rep3_H3k4me3
        14369224
        2.6
        Rep3_SRF
        59621176
        10.8
        Rep3_BPTF
        61181006
        11.1

        Run Statistics

        Showing 1/1 rows and 4/4 columns.
        Number of LanesTotal # of Single-End ReadsTotal # PF Reads% Undetermined% PhiX Aligned
        4.0
        636681120
        553605613
        2.7
        1.2

        MultiQC v1.9 - Written by Phil Ewels, available on GitHub.

        This report uses HighCharts, jQuery, jQuery UI, Bootstrap, FileSaver.js and clipboard.js.