Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content per_tile_sequence_quality 000000000-GG345_l01_n01_Plate1Col1 000000000-GG345_l01_n01_Plate1Col1.fastq.gz Conventional base calls Sanger / Illumina 1.9 6.0 0.0 151.0 46.0 100.0 151.0 pass pass pass fail warn pass pass pass fail pass 000000000-GG345_l01_n01_Plate1Col10 000000000-GG345_l01_n01_Plate1Col10.fastq.gz Conventional base calls Sanger / Illumina 1.9 10.0 0.0 151.0 43.0 100.0 151.0 pass pass pass fail fail pass pass pass fail pass pass 000000000-GG345_l01_n01_Plate1Col2 000000000-GG345_l01_n01_Plate1Col2.fastq.gz Conventional base calls Sanger / Illumina 1.9 73.0 0.0 151.0 44.0 100.0 151.0 pass pass pass fail fail pass pass pass fail pass warn 000000000-GG345_l01_n01_Plate1Col3 000000000-GG345_l01_n01_Plate1Col3.fastq.gz Conventional base calls Sanger / Illumina 1.9 28.0 0.0 151.0 45.0 100.0 151.0 pass pass pass fail fail pass pass pass fail pass pass 000000000-GG345_l01_n01_Plate1Col4 000000000-GG345_l01_n01_Plate1Col4.fastq.gz Conventional base calls Sanger / Illumina 1.9 23.0 0.0 151.0 45.0 100.0 151.0 pass pass pass fail fail pass pass pass fail pass warn 000000000-GG345_l01_n01_Plate1Col5 000000000-GG345_l01_n01_Plate1Col5.fastq.gz Conventional base calls Sanger / Illumina 1.9 60.0 0.0 151.0 44.0 100.0 151.0 pass pass pass fail fail pass pass pass fail pass pass 000000000-GG345_l01_n01_Plate1Col6 000000000-GG345_l01_n01_Plate1Col6.fastq.gz Conventional base calls Sanger / Illumina 1.9 61.0 0.0 151.0 44.0 100.0 151.0 pass pass pass fail fail pass pass pass fail pass pass 000000000-GG345_l01_n01_Plate1Col7 000000000-GG345_l01_n01_Plate1Col7.fastq.gz Conventional base calls Sanger / Illumina 1.9 55.0 0.0 151.0 44.0 100.0 151.0 pass pass pass fail fail pass pass pass fail pass pass 000000000-GG345_l01_n01_Plate1Col8 000000000-GG345_l01_n01_Plate1Col8.fastq.gz Conventional base calls Sanger / Illumina 1.9 64.0 0.0 151.0 44.0 100.0 151.0 pass pass pass fail fail pass pass pass fail pass fail 000000000-GG345_l01_n01_Plate1Col9 000000000-GG345_l01_n01_Plate1Col9.fastq.gz Conventional base calls Sanger / Illumina 1.9 40.0 0.0 151.0 43.0 100.0 151.0 pass pass pass fail fail pass pass pass fail pass pass 000000000-GG345_l01_n01_Plate2Col1 000000000-GG345_l01_n01_Plate2Col1.fastq.gz Conventional base calls Sanger / Illumina 1.9 41.0 0.0 151.0 46.0 100.0 151.0 pass pass pass fail fail pass pass pass fail pass pass 000000000-GG345_l01_n01_Plate2Col10 000000000-GG345_l01_n01_Plate2Col10.fastq.gz Conventional base calls Sanger / Illumina 1.9 74.0 0.0 151.0 42.0 100.0 151.0 pass pass pass fail fail pass pass pass fail pass pass 000000000-GG345_l01_n01_Plate2Col2 000000000-GG345_l01_n01_Plate2Col2.fastq.gz Conventional base calls Sanger / Illumina 1.9 770.0 0.0 151.0 43.0 99.0909090909091 151.0 pass pass pass fail fail pass pass pass warn pass pass 000000000-GG345_l01_n01_Plate2Col3 000000000-GG345_l01_n01_Plate2Col3.fastq.gz Conventional base calls Sanger / Illumina 1.9 149.0 0.0 151.0 44.0 97.98657718120806 151.0 pass pass pass fail fail pass pass pass fail pass warn 000000000-GG345_l01_n01_Plate2Col4 000000000-GG345_l01_n01_Plate2Col4.fastq.gz Conventional base calls Sanger / Illumina 1.9 163.0 0.0 151.0 43.0 99.38650306748467 151.0 pass pass pass fail fail pass pass pass fail pass pass 000000000-GG345_l01_n01_Plate2Col5 000000000-GG345_l01_n01_Plate2Col5.fastq.gz Conventional base calls Sanger / Illumina 1.9 607.0 0.0 151.0 44.0 99.50576606260296 151.0 pass pass pass fail warn pass pass pass warn pass warn 000000000-GG345_l01_n01_Plate2Col6 000000000-GG345_l01_n01_Plate2Col6.fastq.gz Conventional base calls Sanger / Illumina 1.9 405.0 0.0 151.0 43.0 100.0 151.0 pass pass pass fail fail pass pass pass warn pass warn 000000000-GG345_l01_n01_Plate2Col7 000000000-GG345_l01_n01_Plate2Col7.fastq.gz Conventional base calls Sanger / Illumina 1.9 510.0 0.0 151.0 44.0 99.6078431372549 151.0 pass pass pass fail warn pass pass pass warn pass warn 000000000-GG345_l01_n01_Plate2Col8 000000000-GG345_l01_n01_Plate2Col8.fastq.gz Conventional base calls Sanger / Illumina 1.9 656.0 0.0 151.0 44.0 100.0 151.0 pass pass pass fail warn pass pass pass warn pass warn 000000000-GG345_l01_n01_Plate2Col9 000000000-GG345_l01_n01_Plate2Col9.fastq.gz Conventional base calls Sanger / Illumina 1.9 364.0 0.0 151.0 43.0 100.0 151.0 pass pass pass fail fail pass pass pass warn pass warn 000000000-GG345_l01_n01_undetermined 000000000-GG345_l01_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 4587934.0 0.0 151.0 44.0 44.270140315455315 151.0 pass pass pass fail fail pass pass fail pass pass pass 000000000-GG345_l01_n02_Plate1Col1 000000000-GG345_l01_n02_Plate1Col1.fastq.gz Conventional base calls Sanger / Illumina 1.9 6.0 0.0 151.0 40.0 100.0 151.0 pass pass fail fail fail pass pass pass fail pass 000000000-GG345_l01_n02_Plate1Col10 000000000-GG345_l01_n02_Plate1Col10.fastq.gz Conventional base calls Sanger / Illumina 1.9 10.0 0.0 151.0 40.0 70.0 151.0 pass pass fail fail fail pass pass pass fail pass pass 000000000-GG345_l01_n02_Plate1Col2 000000000-GG345_l01_n02_Plate1Col2.fastq.gz Conventional base calls Sanger / Illumina 1.9 73.0 0.0 151.0 42.0 54.794520547945204 151.0 pass pass pass fail fail pass pass warn fail pass fail 000000000-GG345_l01_n02_Plate1Col3 000000000-GG345_l01_n02_Plate1Col3.fastq.gz Conventional base calls Sanger / Illumina 1.9 28.0 0.0 151.0 41.0 75.0 151.0 pass pass fail fail fail pass pass pass fail pass fail 000000000-GG345_l01_n02_Plate1Col4 000000000-GG345_l01_n02_Plate1Col4.fastq.gz Conventional base calls Sanger / Illumina 1.9 23.0 0.0 151.0 40.0 60.86956521739131 151.0 pass pass pass fail fail pass pass warn fail pass warn 000000000-GG345_l01_n02_Plate1Col5 000000000-GG345_l01_n02_Plate1Col5.fastq.gz Conventional base calls Sanger / Illumina 1.9 60.0 0.0 151.0 40.0 50.0 151.0 pass pass pass fail fail pass pass warn fail pass fail 000000000-GG345_l01_n02_Plate1Col6 000000000-GG345_l01_n02_Plate1Col6.fastq.gz Conventional base calls Sanger / Illumina 1.9 61.0 0.0 151.0 42.0 52.459016393442624 151.0 pass pass pass fail fail pass pass warn fail pass fail 000000000-GG345_l01_n02_Plate1Col7 000000000-GG345_l01_n02_Plate1Col7.fastq.gz Conventional base calls Sanger / Illumina 1.9 55.0 0.0 151.0 41.0 56.36363636363636 151.0 pass pass pass fail fail pass pass warn fail pass fail 000000000-GG345_l01_n02_Plate1Col8 000000000-GG345_l01_n02_Plate1Col8.fastq.gz Conventional base calls Sanger / Illumina 1.9 64.0 0.0 151.0 41.0 59.375 151.0 pass pass fail fail fail pass pass warn fail pass fail 000000000-GG345_l01_n02_Plate1Col9 000000000-GG345_l01_n02_Plate1Col9.fastq.gz Conventional base calls Sanger / Illumina 1.9 40.0 0.0 151.0 42.0 62.5 151.0 pass pass pass fail fail pass pass warn fail pass fail 000000000-GG345_l01_n02_Plate2Col1 000000000-GG345_l01_n02_Plate2Col1.fastq.gz Conventional base calls Sanger / Illumina 1.9 41.0 0.0 151.0 39.0 21.951219512195124 151.0 pass pass pass fail fail pass pass fail fail pass fail 000000000-GG345_l01_n02_Plate2Col10 000000000-GG345_l01_n02_Plate2Col10.fastq.gz Conventional base calls Sanger / Illumina 1.9 74.0 0.0 151.0 38.0 21.62162162162162 151.0 pass pass pass fail fail pass pass fail fail pass fail 000000000-GG345_l01_n02_Plate2Col2 000000000-GG345_l01_n02_Plate2Col2.fastq.gz Conventional base calls Sanger / Illumina 1.9 770.0 0.0 151.0 40.0 18.051948051948052 151.0 pass pass pass fail fail pass pass fail fail pass warn 000000000-GG345_l01_n02_Plate2Col3 000000000-GG345_l01_n02_Plate2Col3.fastq.gz Conventional base calls Sanger / Illumina 1.9 149.0 0.0 151.0 39.0 14.093959731543624 151.0 pass pass pass fail fail pass pass fail fail pass fail 000000000-GG345_l01_n02_Plate2Col4 000000000-GG345_l01_n02_Plate2Col4.fastq.gz Conventional base calls Sanger / Illumina 1.9 163.0 0.0 151.0 40.0 16.56441717791411 151.0 pass pass pass fail fail pass pass fail fail pass fail 000000000-GG345_l01_n02_Plate2Col5 000000000-GG345_l01_n02_Plate2Col5.fastq.gz Conventional base calls Sanger / Illumina 1.9 607.0 0.0 151.0 40.0 17.1334431630972 151.0 pass pass pass fail fail pass pass fail fail pass warn 000000000-GG345_l01_n02_Plate2Col6 000000000-GG345_l01_n02_Plate2Col6.fastq.gz Conventional base calls Sanger / Illumina 1.9 405.0 0.0 151.0 40.0 13.82716049382716 151.0 pass pass pass fail fail pass pass fail fail pass warn 000000000-GG345_l01_n02_Plate2Col7 000000000-GG345_l01_n02_Plate2Col7.fastq.gz Conventional base calls Sanger / Illumina 1.9 510.0 0.0 151.0 40.0 14.901960784313726 151.0 pass pass pass fail fail pass pass fail fail pass pass 000000000-GG345_l01_n02_Plate2Col8 000000000-GG345_l01_n02_Plate2Col8.fastq.gz Conventional base calls Sanger / Illumina 1.9 656.0 0.0 151.0 39.0 20.579268292682926 151.0 pass pass pass fail fail pass pass fail fail pass warn 000000000-GG345_l01_n02_Plate2Col9 000000000-GG345_l01_n02_Plate2Col9.fastq.gz Conventional base calls Sanger / Illumina 1.9 364.0 0.0 151.0 40.0 17.857142857142858 151.0 pass pass pass fail fail pass pass fail fail pass warn 000000000-GG345_l01_n02_undetermined 000000000-GG345_l01_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 4587934.0 0.0 151.0 40.0 2.794957141112561 151.0 pass pass pass fail fail pass pass fail fail pass pass