FastQCFastQC Report
Thu 19 Jul 2018
HY7YMBGX5_n01_DAM_GR_bZIP1_R2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHY7YMBGX5_n01_DAM_GR_bZIP1_R2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24132114
Sequences flagged as poor quality0
Sequence length76
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG264200.10948066961725773No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGGATC9269200.063.53753711
AGGATCC2211950.063.39697312
AGGATCT3444900.063.3288412
AGGATCA3170300.063.26574712
CGAGGAT9328750.063.2080810
GGATCCA976500.063.11894213
CGGCCGA9383600.063.087596
GGATCTC891100.062.97038313
GGCCGAG9403350.062.962917
GCGGCCG9402150.062.9565545
CCGAGGA9385450.062.947799
GCCGAGG9408300.062.9370278
CGCGGCC9399950.062.904274
GGTCGCG9382400.062.8337021
TCGCGGC9404800.062.699283
GTCGCGG9408000.062.6960682
GGATCAC491650.062.6860113
GGATCTA673800.062.68335713
GGATCAT1255200.062.59111813
GGATCCC338400.062.58132613
Produced by FastQC (version 0.11.5)