FastQCFastQC Report
Thu 19 Jul 2018
HY7YMBGX5_n01_DAM_GR_R3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHY7YMBGX5_n01_DAM_GR_R3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16012984
Sequences flagged as poor quality0
Sequence length76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAATAC573550.063.835761
GGATCCG174850.063.77092413
AGGATCA2144700.063.66541312
GAGGATC6350750.063.61705811
AGGATCG401550.063.5979712
GGATCCA637350.063.56573513
TAATACG570850.063.525492
GGATCAC328500.063.390513
GGATCAT808000.063.3861413
AGGATCT2337100.063.3838612
AGGATCC1483250.063.369712
CGAGGAT6385050.063.33556410
GGATCTA401050.063.27643213
GGATCTT970050.063.26365313
CGGCCGA6410850.063.244776
GGATCTC595650.063.1684613
GGATCAA769700.063.16181613
CCGAGGA6414150.063.0989579
GGTCGCG6400800.063.0858761
GCGGCCG6424250.063.0819935
Produced by FastQC (version 0.11.5)