HVJJYBGX5_n01_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVJJYBGX5_n01_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	67402389
Sequences flagged as poor quality	0
Sequence length	76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCCGT	1084305	1.6087041069122936	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	764234	1.1338381492679734	No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCGT	492553	0.7307648991491977	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGT	442689	0.6567853255171712	No Hit
CTTATACACATCTCCGAGCCCACGAGACTCCTGAGCATCTCGTATGCCGT	295061	0.43776044792714985	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCCG	125109	0.18561508257518886	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	285455	63.619564	70
AAGGGGG	331295	54.812138	69
AAAGGGG	335890	54.135677	68
AAAAGGG	338010	53.895584	67
AAAAAGG	344375	53.060577	66
TTGAAAA	357000	52.718884	58
TACGCTA	69360	52.56912	31
GAAAAAA	363955	52.121193	60
CTAGGCA	64385	51.76554	28
CTTGAAA	364320	51.495617	57
AAAAAAG	357690	51.488564	65
ACTAGGC	64835	51.436733	27
CTCGTAT	360290	51.348366	39
TCCTATC	155895	51.037964	33
TGAAAAA	371130	51.02602	59
GACTAGG	65760	50.842823	26
CTCCTAT	159305	50.594402	32
TCTCGTA	364590	50.560364	38
ACGCTAT	72065	50.49847	32
GCTTGAA	373170	50.216026	56