FastQCFastQC Report
Sat 25 Aug 2018
HHL33BGX7_n01_18_C_R_EV_Col_H3K27Ac.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHL33BGX7_n01_18_C_R_EV_Col_H3K27Ac.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17765305
Sequences flagged as poor quality0
Sequence length76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG23900.026.9511648
CGTATGC26000.025.58147446
GTATGCC29050.023.13723247
ATGCCGT28600.021.78764349
TGCCGTC32950.018.1677350
GCCGTCT29800.017.73850451
TCTCGTA51550.013.03897943
TATCTCG62000.011.85724841
CCGTCTT50200.011.50609652
CTCGTAT59250.011.28448544
TCGTATG61300.011.13562445
ATCTCGT67850.010.78347842
ACATTCC91700.09.46600132
TTATCTC100850.07.914238540
CACATTC115650.07.74760531
GTCACAT111800.07.669864729
CTGCTTG69500.07.604449359
CATTCCT124500.07.45022333
ATTCCTT130700.07.311071434
CCTTTAT131850.07.24822237
Produced by FastQC (version 0.11.5)