FastQCFastQC Report
Sat 25 Aug 2018
HHL33BGX7_n01_16_C_R_bZIP1_Col_H3K27Ac.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHL33BGX7_n01_16_C_R_bZIP1_Col_H3K27Ac.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20896892
Sequences flagged as poor quality0
Sequence length76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATGC34600.023.37119346
TATGCCG38650.020.74255248
GTATGCC38050.020.60925347
GCCGTCT40300.019.37211451
TGCCGTC44300.018.33422550
ATGCCGT43800.018.06381449
CCGTCTT60800.013.07056352
TCTCGTA63800.012.45587143
CTCGTAT72050.011.32029144
TCGTATG74200.011.2754245
ATCTCGT75950.010.60105842
CACACTG256800.010.58838370
ACTGATA180850.010.35234970
TGGGGGG19300.010.3363681
ACACTGA237650.09.95434270
TATCTCG85600.09.73305641
TCACACT335300.09.6227970
GTCACAC355900.09.46895270
CTGCTTG87000.09.33342459
CACTGAT228400.08.93256370
Produced by FastQC (version 0.11.5)