FastQCFastQC Report
Sat 25 Aug 2018
HHL33BGX7_n01_14_C_R_TGA1_Col_H3K27Ac.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHL33BGX7_n01_14_C_R_TGA1_Col_H3K27Ac.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36154853
Sequences flagged as poor quality0
Sequence length76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATGC52750.017.65213246
TATGCCG54850.016.91320248
GTATGCC60200.015.70068347
ATGCCGT61800.015.35100649
TGCCGTC66500.013.89761150
GCCGTCT97800.09.77198651
TCTCGTA103900.09.23235943
CTCGTAT108900.08.936131544
TCGTATG113000.08.89072645
AGTCACG269500.08.54401870
TATCTCG126400.08.1425441
TCACGAG209800.08.05631970
ATCTCGT125650.07.968331342
CTCCAGT491250.07.857203570
CAGTCAC369700.07.714418470
GTCACGA243100.07.62932270
ACTCCAG542600.07.28130570
CCGTCTT142550.07.048126752
CGTCTGA1065900.06.89113970
TCTGAAC911650.06.82493770
Produced by FastQC (version 0.11.5)