FastQCFastQC Report
Sat 25 Aug 2018
HHL33BGX7_n01_12_C_R_NLP7_nlp7_H3K27Ac.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHL33BGX7_n01_12_C_R_NLP7_nlp7_H3K27Ac.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37258005
Sequences flagged as poor quality0
Sequence length76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTTTCG156400.014.14386433
TCGGAAT161500.013.37393737
GTTTCGG173750.012.75163934
TTTCGGA192600.011.77631335
CGGAATC186250.011.12684538
TTCGGAA203250.011.10766336
ACGTTTC205400.010.95706332
GCGGGGT42500.010.37848752
CACGTTT224600.010.30071231
GTCACGT214350.010.28692329
TCACGTT247250.09.272130
TGCGGGG25850.09.20877751
AGTCACG246000.09.03509528
CGGGGGT26650.08.80038144
CGGGGTG60050.08.74429653
ATCGGGG77400.08.63866442
AATCGGG99950.08.33580941
AATCGCG64250.08.00935941
GGAATCG214700.07.092611339
CAGTCAC326450.06.946501770
Produced by FastQC (version 0.11.5)