HGWHTBGX7_n02_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HGWHTBGX7_n02_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	32373093
Sequences flagged as poor quality	0
Sequence length	50
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	2328286	7.192040624601424	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	482871	1.491581295614849	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCATAGC	63735	43.16245	1
TGTCCGA	25955	43.110764	6
ATAGCTC	63590	43.100388	3
TAGCTCT	63280	43.043766	4
CCGATTC	25540	43.010227	9
TTGTCCG	26160	42.940735	5
CATAGCT	64100	42.798054	2
TGTACCC	40310	42.78842	10
ACATCGG	18470	42.773506	5
GTTGTAC	41045	42.45721	8
TCGGTCC	18300	42.42602	8
CATCGGT	18470	42.41656	6
TCCGATT	26185	42.379345	8
TTGTACC	40835	42.336067	9
GATTCCC	26105	42.31499	11
AGTTGTA	41460	42.24449	7
CGATTCC	26010	42.215332	10
AGTTGTC	26975	42.156715	3
CACATCG	18900	42.04428	4
CGGTCCC	18485	41.918037	9