HGWHTBGX7_n02_cDNA_c.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HGWHTBGX7_n02_cDNA_c.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	75449369
Sequences flagged as poor quality	0
Sequence length	50
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	5386320	7.138986145795334	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	465153	0.6165101261483048	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	338542	0.448700902985683	No Hit
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	217759	0.2886160651655019	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	621045	42.392735	1
AGCAGTG	651295	40.35059	2
TCAACGC	682035	38.49671	12
ATCAACG	682780	38.488064	11
TGGTATC	680650	38.482998	7
GTGGTAT	681950	38.449562	6
CAACGCA	684090	38.414932	13
GTATCAA	685860	38.273678	9
TATCAAC	687790	38.256466	10
GGTATCA	685885	38.245064	8
AGTGGTA	686680	38.208866	5
AACGCAG	691115	38.053886	14
CAGTGGT	690365	37.976685	4
ACGCAGA	692985	37.910095	15
AGAGTAC	687735	37.77184	19
CGCAGAG	695585	37.759823	16
GCAGAGT	695940	37.528446	17
CAGAGTA	696825	37.43862	18
GAGTACT	689865	37.399357	20
GTACTTT	687835	37.28958	22