HGWHTBGX7_n02_cDNA_b.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HGWHTBGX7_n02_cDNA_b.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	124340384
Sequences flagged as poor quality	0
Sequence length	50
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	8690235	6.9890688129127865	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	807986	0.6498178419651656	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	559810	0.4502237985689348	No Hit
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	357704	0.28768127336650334	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	1002230	42.367447	1
AGCAGTG	1050940	40.316483	2
TCAACGC	1103805	38.38343	12
ATCAACG	1105040	38.373	11
TGGTATC	1102320	38.347878	7
GTGGTAT	1104330	38.296883	6
CAACGCA	1107970	38.271233	13
GTATCAA	1109820	38.151463	9
TATCAAC	1113080	38.13499	10
GGTATCA	1110810	38.100746	8
AGTGGTA	1111295	38.083767	5
CAGTGGT	1115810	37.896187	4
AACGCAG	1119885	37.884987	14
ACGCAGA	1122780	37.743877	15
AGAGTAC	1113455	37.643917	19
CGCAGAG	1127560	37.592815	16
GCAGAGT	1127975	37.371002	17
CAGAGTA	1127575	37.325108	18
GAGTACT	1116425	37.26391	20
GTACTTT	1112355	37.197857	22