HGWHTBGX7_n02_cDNA_a.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HGWHTBGX7_n02_cDNA_a.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	76202122
Sequences flagged as poor quality	0
Sequence length	50
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	5462420	7.168330561713229	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	468588	0.6149277575236028	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	339912	0.4460663182056793	No Hit
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	219785	0.2884237265728637	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	627245	42.368263	1
AGCAGTG	656565	40.403313	2
TCAACGC	687725	38.56666	12
ATCAACG	688395	38.56313	11
TGGTATC	686865	38.530197	7
GTGGTAT	687735	38.494072	6
CAACGCA	689950	38.47243	13
TATCAAC	692960	38.34625	10
GTATCAA	691855	38.308777	9
GGTATCA	691750	38.29434	8
AGTGGTA	692590	38.24534	5
AACGCAG	697240	38.07911	14
CAGTGGT	695260	38.07108	4
ACGCAGA	698805	37.955948	15
AGAGTAC	693270	37.835793	19
CGCAGAG	701475	37.81676	16
GCAGAGT	702525	37.556038	17
CAGAGTA	702710	37.485985	18
GAGTACT	694960	37.463505	20
GCAGTGG	708710	37.391563	3