FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p7H7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p7H7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCTACCATCACCATCTGCATCAACTTGCATAATCATCTTCTTACAACC13.125No Hit
GCTTCTCAGGAGTATTTCATCAGACACAAAGACGGTTGCACTCTTGACAC13.125No Hit
TCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGA13.125No Hit
TGTTAACGGGGCTGATTAAAATGGGTCTTTCTTTTTATCTTTTTATATTT13.125No Hit
GTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCGCGCCGCGG13.125No Hit
TCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAAC13.125No Hit
GGTCCCGACAGGCATGCTCACACTCGAACCCTTCTCAGAAGATCAAGGTC13.125No Hit
TGGTAAAGCAAGAGGAAAATCTGGTTGACTACCGCATCGAGACTGACTTG13.125No Hit
GTCTCACGACGGTCTAAACCCAGCTAACGTTACCTATTGGTGGGTGAACA13.125No Hit
TCTTTTTAGTGCTGCAAAGAAGTGCTCCCCGTGTATTATATTTATCGATG13.125No Hit
GTCGTGGGGGGGTTTCAAAAGAAAAAAAATTCATTATAGCTTACTAGAGG13.125No Hit
AATCATACCCAAAGACAAGACCATCCGCGGTCAAAACATCGGTGTCTGTG13.125No Hit
GAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGG13.125No Hit
CTACAACAAAGTGGAAGTGGAAGGGCCGCTATAGAAGCTAGAACTTGCTT13.125No Hit
GTTCACATCATCAAAGCTTGTGGACATAAAGTACAACACTAAATCTCCAT13.125No Hit
AGCCAGGGGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGA13.125No Hit
ATCTTATGGAGAAGACTCTTGTCCTTGCTTTGGCAACTGGCAACAAAAAG13.125No Hit
GTTCCGAACTCAACGGTGGCAACTAAAACACGAGGGTTGCGCTCGTTGCG13.125No Hit
GGCCGCCGAAGCCTCCACGACCTTGCTGCAGGGAGCACTCCTGACCACCG13.125No Hit
GATTAGAGGCATTGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAA13.125No Hit
GCCTTTGGGAGCCTAAGCTCCTACTGAGGGTCGGCAATCGGGCGGCGGGC13.125No Hit
GTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAAT13.125No Hit
GGCTTAGGCCGCCACCGTAATCCGCGTCGGTCCACGCCCCGAATCGATCG13.125No Hit
ATTTATTTCTAGGTGTACTTTGATTACATGAGAAGTTTTCGGATAGAACT13.125No Hit
GTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTT13.125No Hit
TTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGC13.125No Hit
AGTACGTTGTGCTCATGTGCAGTGACCAAAGCAGATCTTCGCTGAAGGAA13.125No Hit
CTTCTCAGAAGATCAAGGTCGGTCGGCGGTGCACCCGCGAGGGATCCCGC13.125No Hit
CACAAGGGGCGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCAT13.125No Hit
ATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTC13.125No Hit
CTCTAACGGCGTACCTTTTGCATGATGGGTCAGCGAGGAAATGGGAAGAG13.125No Hit
TATTTAAAGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCAATGCCTCTA13.125No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)