FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p7H10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p7H10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTAGCCACCATATCAACTCAAGTGTTTGACCAGTAGACAACTCCCGCA14.761904761904762No Hit
CTGCTGAGCAGTGTCTTGATTTGTGCTTCTTCGTACTGAAGAATCAGTCG14.761904761904762No Hit
GAAGCTTCATGGCTTCTGTTGCCAGGAACGTTGACCCTGATAACGCTTTC14.761904761904762No Hit
GTGCCCAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTA14.761904761904762No Hit
ATGCACACCAAAGGCGGACCGGCCGACCCATCCCAAGGTTCAACTACGAG14.761904761904762No Hit
GTAGGGTAAAACTAACCTGTATCACGACGGTCTAAACCAGCTCACGTTCA14.761904761904762No Hit
GGATTTAACCGGGCGGGTAACGTTTGAGACGGTTAGATCGTTGGTTAGAA14.761904761904762No Hit
GGCCCCCGCCGACGTCTCCGGCCTCCCTAACGTTGCCGTCAACAGCCACG14.761904761904762No Hit
GTATTGGTTGAATATAATGCATTTTGGGAAAACACGGTCTTCAATACTGT14.761904761904762No Hit
GTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAA14.761904761904762No Hit
GGATCTCACTGCTAACTACTCTCACTGAAATCCCTTAGATATTCTTTTCA14.761904761904762No Hit
GGCGGAGGAAAAGAAGACCGAGGATAGATTCTGACCAAGAAACATAACTC14.761904761904762No Hit
CCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTG14.761904761904762No Hit
GGGAAACCCCGTCTGATAGCGCTTAAGCGCGAACTTCGAAAGGGGATCCG14.761904761904762No Hit
ATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACGAATT14.761904761904762No Hit
GTTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAACCTTGGGATGGGTC14.761904761904762No Hit
ACTTTGGCCGACTACAACATCCAGAAGGAGTCTACTCTTCACTTGGTCCT14.761904761904762No Hit
GGGGTAAAGACAAGCATCATGATGCGCAAGAGAAAGGATTGCATGGTTTT14.761904761904762No Hit
GTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGAAGCTCCCAC14.761904761904762No Hit
AACCATTGGAGCCAATATATCGAGCGATCTCACCGTTTTTATCAATAGCC14.761904761904762No Hit
CGTCTCCCAGAGAGATCGGAAGAGCACACGTCTCCCAGAGAGATCGGAAG14.761904761904762Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)