FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p7F9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p7F9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTTCAACCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCG110.0No Hit
TTTGCAGCCTCTACTCGAACCATGGGGTGCTCCTTCACATCTCTCAAGAT110.0No Hit
GGATACATTAGCATGGGATAACATCATAGGATTTCGATCCTATTGTGTCT110.0No Hit
CTTCCGATCTCAACTGGGGGGAAACAACCCAGACCGCCAGCTAAGGTCCC110.0No Hit
TACCGGGGGTGTGCATTGGTAGGCTTGACCCTTCGGTCGGCGATACGACC110.0No Hit
CCCAATTGGTGGGTGAACAATCCAACACTACGTCAATTCTCCTTCACAAT110.0No Hit
TAGCAGAAGCCAACGCAACACCACCACCACCTCCAGATGGTACTGAAGAT110.0No Hit
GCTACTAGATGGTTAGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGA110.0No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA110.0No Hit
GATAAACTAACCAGCAGACACGTCCTACCTATTAAAAGATTCACAATTTG110.0No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)