FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p7F7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p7F7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATGTTACGTTTATAGCATATCAATTTTTGTAAGCTTAATCAGCTGAAG15.0No Hit
CTATCGGTGTTGCTGCGTCAGCAAAATAACAGATTTATCTCTGGAAGCAG15.0No Hit
GAGTACAACCCCTTCGACTTGCTGAGTGGGATTCTGATGATAAAGTTACA15.0No Hit
ATTGTGATGTTGTGTTTACCAACTGCTTCTTCGAGGGTCTGGAGAAGGAG15.0No Hit
ATCCACAGCGTAGCCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG15.0No Hit
GTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGC15.0No Hit
GCTACTAGATGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGA15.0No Hit
CAAATACTACTGCAAAACTTACAGCACTGATACATCAAGATCGAGAGTAA15.0No Hit
GTACGAATACGAACCGTGAAAGCGTGGCCTATCCATCCTAAAGACCTTAG15.0No Hit
TTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGTTCATCC15.0No Hit
GTTAAAAGTAGTGGTATTTCACTTGCGCCGAAGCTCCGACTTATCCTACA15.0No Hit
CATACTTTTGAGGTTCAAGAGATCCTTTAGGAAACCACTGAATGGTTGGG15.0No Hit
GGCCTTAAAACCGCAATTAAAATCGAAAAAAGGAGGAAGAAGCAATGCTT15.0No Hit
CCATAGGGAACGTGAGCTGGGATTAGACCGTCGTGAGACAGGTTAGTTTT15.0No Hit
GTACAATGAGTTTTATGAGAATTTAGTTTTACAAGCCTTCCTTGGATGGT15.0No Hit
CAAGAACACCGTTCCAGAGCAGGAGACCCCTAAGGTTGCAACAGAGGAAT15.0No Hit
GAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGA15.0No Hit
ATTCTCAAACTTTAAATAGGTAGGACGTGTCGGATGCTTTGTTGTGCCGT15.0No Hit
AGCTTGTCTTGTCATCTCCATAATTGACTTCTAAATACAAAACGTAGCAC15.0No Hit
GCATCGTTTATGGTTGAGACTAGGACGGTATCTCATCGTCTACGAGCCAC15.0No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)