FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p7F5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p7F5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGA17.6923076923076925No Hit
ATTTCAAGCACTCTTTGACTCTCTTTACAAAGTCCTTTTCATCTTTACAT17.6923076923076925No Hit
GACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGA17.6923076923076925No Hit
GTAGAGAGGTGTTACATAAGAAGCTTTCACTTTCACAGTACTTATATGGA17.6923076923076925No Hit
CCTATGATGTAATCCCATGCTAATGTATCCAGAGAGTAGGCTTGCTTTGA17.6923076923076925No Hit
GTACACTGGAAAAGCCCAACACTCCAACCTAAATAAGGACCCCCAGGAAT17.6923076923076925No Hit
TAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAAAATCGGACATCT17.6923076923076925No Hit
AACTTAAAACTTTACAGTCAGAGGTTCAATTCCTCTTCTTAACACCTCAC17.6923076923076925No Hit
ACGAAGAGCTTCGTGGATTGGGCTCGGCTTAGTGTCACGGCTATAGCGGT17.6923076923076925No Hit
GGCATATCGGTCAAAGGTAGGGCATTTTCCATTTTTATAGGAACTTCTGT17.6923076923076925No Hit
CTCCTCTGTTTTCTTCGTTGGTTCATTGAGAAAAAAGGAACAGACTTTTT17.6923076923076925No Hit
ACATAAAGAAGTACATTACAGCGACGGAAATCGAAGCAATCGCCGTTGGG17.6923076923076925No Hit
TTTCACGCCCTGCGGCATGAAGCGCTGGCCGGGGTCCATCACCGCATCGG17.6923076923076925No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)