FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p7F2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p7F2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AATCACATTAGCAAATGAACAAAACATAAGACTATCCACAGTATCCTCGA16.25No Hit
ATGTAAAGCAGACTGAAGCTCTTGAGAAGAAGAATAGAATAGTGGAACTG16.25No Hit
ACAAAAATATACGCTATTGGACCTGCAATTACACCTGATTATCGGACCAT16.25No Hit
GTTAGGCGCGTGCTGCAGACCACGATCACCGCAGCGACGTCTCCACAAGC16.25No Hit
GGCGAGAACTCGCTCCACTTGTGAGTTACATCAGAAAGGTCTTTTAGAGT16.25No Hit
TGACAAGGGACATGACATGCATATGCAAGCGGCTCCATCCCAAGCTGAAT16.25No Hit
TCATTGCACCAGTGTTTGCAGAGATGGGTAAGAAGTTCACTAATGTTGTC16.25No Hit
AGCTCAAAGGACATCAAAAGAGCTAAGAAAGTTTCAGGAGATGACGATAA16.25No Hit
AGCAAATCCCACTGATCTTGTGAAAGTTAGGCTTCAGGCCGAAGGAAAAC16.25No Hit
GGCCTTTCTTCGACGAGAGCACATGATAGTAATTGTAACGCTGGTAGTAC16.25No Hit
CTGCAGAAGGTCGAGCTTTGGCGACTTTAGCCAAGGCTTTGTTCTCATCA16.25No Hit
CCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGGACGCGAGTTCTATCG16.25No Hit
GTGTGGGTCAGACTTTCACAAAAAGAAGTTGTCGAGGCCATGGCTACCAA16.25No Hit
GAACAAGCTCCTCTCGATCTCTGGCTCATCATCGCGAGGGAGTACTTCAA16.25No Hit
GTATTCATTACGGTATTTGATCAACATCTATTGTGAGAATTAAAAGGAAA16.25No Hit
AATCATTACGAAGAGCCCGAAGGCCATCACAATAGGATGTCAATCCAATG16.25No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)