FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p7F11.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p7F11.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAATCGGAGAACGAGCATGGATGGTAGCATGAGGATCACCTCCGCCATG112.5No Hit
TATAAATATAGCTTGGGAATACCAGATCAAGGAATCCATAAACATTATTT112.5No Hit
CTTCCGATCTGCAGAGGGCAGAATTCACCAAGTGTTGGATTGTTCACCCA112.5No Hit
GGAAAGACCATCACTTTGGAGGTGGAGAGTTCTGACACCATTGATAACGT112.5No Hit
ATCAACTGCGGCGCGGGCGTCACCGCGCGCTTGCGCCGCAGTTGATAGTA112.5No Hit
GTCAGAGCCTGTGTGGTGATGGCGTGCCTTTTGAAGAATGAGCCTGCGAG112.5No Hit
TCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATG112.5No Hit
CTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAACGGG112.5No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)