FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p7E6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p7E6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTGAGTGTTGGATATTGCTTCAGTTCAGATGTTTTCGCCCATGGATTTG14.0No Hit
ACTACTGCCACTTCAAAACCCTAATCCACTTTACCCATCGAACCTCGACA14.0No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA14.0No Hit
CACTTATGCTGCATATAGTCCGCATACGATAGATCCCCTGGAAGTAGATG14.0No Hit
ATCTTCTTAACAATTGCAAAATACATAAAAGATAAAATCAGATCAGAAAT14.0No Hit
GGCTTTACCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGC14.0No Hit
ACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACGG14.0No Hit
ACACAAAAGGCTCAGGAGACAAAGAACAACAATTTCATCCATGGTTCGAC14.0No Hit
TCCCCGTAGTAACAATGGGTTGAGGTGGTCTTAATAATGAGTAAAGTTAT14.0No Hit
GTTAAAACTGGTTCAGATTATTGGCGTGATTATGAAGTTAAGAGAAATTT14.0No Hit
GTCAAGATGCGTGAGACGAGAAAGGTTTTCTAGTGAAGAAGTAACCTCTC14.0No Hit
GAACTCGTACGGACAAGGGGAATCCCACTGTTTAATTAAAACAAAGCATT14.0No Hit
ACCATAGGATTGTTGAGGGTTGTAACCACCTTGACCCATCATCGGATTGT14.0No Hit
CCGCATCCGACCAGGACGCATCGCCGGCCCCCATCCGCTTCCCTCCCGAC14.0No Hit
AGTTATGACTGGTTAAAAGTAATTGTAACAGTTTTGAGCGATGAAATTAA14.0No Hit
TGCAGAGACCAGCCCAATCGCCAAGGCTCTTGGCACATGGAACTGTTAGC14.0No Hit
CTGTACAAACGAGAACGGCCTGTATTCGGAGTTTCCCTGGGGTTGGTAAG14.0No Hit
TAATTATAATTCAAGGCGGTCCGAACGACGCTTCCGCCGAACGGACTTAG14.0No Hit
AGGACATCCCTTCGGCTTTGCTCAATTCCCAAGTGAGTGTTCATACTAGC14.0No Hit
CCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGA14.0No Hit
CTACTGCACAGTCATTGATGCCCCAGGACATCGTGATTTCATCAAGAACA14.0No Hit
GTACTTGTTCGCTATCGGCCTCTCGCCCGTATTTAGCCTTGGACGGAATT14.0No Hit
GAGATTAAGCATAACAAAAACCGGAGGAAAAGAAACTAACAAGGATTCCC14.0No Hit
GACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCG14.0No Hit
ATATATAACAACCCAATTGGTGTCATCTGAAATAGCAAGACAGGGATCAA14.0No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)