FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p7E5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p7E5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGAAAGATGGTGAACTATGCCTGAGCGGGGTAAAGCCAGAGGAAACTCT15.263157894736842No Hit
AATGCAACCTAATCACTAGGCGATCCCGAAGGGACTTAAGTTTTAGACCG15.263157894736842No Hit
ACCCGAATCGATCCTCGGACCGGATTGCTCCGATCCGCATCCGACCACGA15.263157894736842No Hit
GACTCATACGGACTTTGGCTACCCCATCAAAGCTTTGAGAAGCAAGAAGA15.263157894736842No Hit
CACGTTAGATGCTACATGATTCAACATCCTTCGAGGGAAGCAGGAGAGAT15.263157894736842No Hit
TAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTATGGAAGTGA15.263157894736842No Hit
GGTAGAGACAATAAATAAAAATACCGGGCTCTTTCGAGTCTGGTAATTGG15.263157894736842No Hit
TATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAA15.263157894736842No Hit
CAACCCTAATGATCTTCCCGAGTAAACTTCCCGGCTGCTTCCAATCCGCG15.263157894736842No Hit
AATTAAGACCAGGAGCGTATCGCCGACCGAAAGGGACAAGCCGACCAATG15.263157894736842No Hit
ATGGGGTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGAT15.263157894736842No Hit
ACCAAAGATCGACTCTTACTTATAAACTCTCACAACATTATTCGTCAGCT15.263157894736842No Hit
GGCTGGATATCCAGCTGGAACCGGTGGTTATCCGCCACCTGGTGCATACC15.263157894736842No Hit
GATCGGAGTTTAACTACGGCCGTATAGCAGACAATCTTCCGGCACCGGAG15.263157894736842No Hit
CCATAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTA15.263157894736842No Hit
TTACCCGATAGAACTCGCGTCCGAGCTCCAGCTATCCTGAGGGAAACTTC15.263157894736842No Hit
CATCCAGCCGCAGGACCCTACCTCCGGCAGAGCCGCTACCACGGACCGCA15.263157894736842No Hit
GTCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCAA15.263157894736842No Hit
GGACACCACGACAAGACAGCAGAGGATGATGTACCAGTTTCCACTACCAT15.263157894736842No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)