FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p7D7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p7D7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGCAAGGAAGCTGATTGGCGGGATCCCTCGCGGGTGCACCGCCGACCG18.333333333333332No Hit
CCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGT18.333333333333332No Hit
ATTAAATTAGGACTGTTTCCGGTCGCTCGTTGGGAATCGCTTCAACATAC18.333333333333332No Hit
CACCACTACAACGTCGCAGGCAGCCCCATACCGCCCAAGTACAACGCCAA18.333333333333332No Hit
GAGCTTCTTCTGCGTAAAGTTTGATCCTTTGAAAATGACGGAAGAACCAG18.333333333333332No Hit
CATTTAAGACTACTAGGTCCGTGTTACAAGACGGGTAGAATGGGGAGCCC18.333333333333332No Hit
CTTCACGAGTTAGTGCAAGAAGAAGCGTTGTCGGATAAGAAAGAAGAATG18.333333333333332No Hit
CTTCTCCTTAATCCTGTCCATTACTCCTTGATTCTCTTCTTCCACTGTTT18.333333333333332No Hit
TTCCTCACCTTCGTACATAGGTTCTTCGGCAGATACAGCTGGGATATAAG18.333333333333332No Hit
CTATTAAGGATCGCATCCCGCGCATATTCTACATTATAGCCTGCAACTAA18.333333333333332No Hit
AACCTAGAACCCACAAAGGGTGTTGGCCGATTAAGACAGCAGGACGATGG18.333333333333332No Hit
GCTCTCAACTCATTTCACAATGTCGGACTAGAGACATGCTCTACAGGGAC18.333333333333332No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)