FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p7D4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p7D4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCTTCGGCGGGTAGATCCGGGCGGAGGACATTGTCAGGTGGGGAGTTTT17.6923076923076925No Hit
CTTGTTTGCATTTCGCTGGTTATTAAGCAGATGCAAATTGAGTTCTAGGT17.6923076923076925No Hit
CTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATC17.6923076923076925No Hit
TCGTTATCCAGATCGGAAACCGCCGTCACATACGACTCACCATATCCACT17.6923076923076925No Hit
CTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGG17.6923076923076925No Hit
GCTATATGCTTAACACATGCAAGTCGAACGTTGTTCTCGGGGAGCTAGGC17.6923076923076925No Hit
GAAAGGTCGGGAGAAAGCCTGGCGGCTCATCTGAAAAAATATATACCAGG17.6923076923076925No Hit
GTTTATGGTTGAGACTAGGACGGTATCTGATAGTCTTCGAGCAACCAACT17.6923076923076925No Hit
CTTCCGATCTCGCCTGGGAGACGTGTGGTCTTCCGAGCTCGCCTGGGAGA17.6923076923076925No Hit
GTCGGGGCAAGAGCCAGGCCTCGATGAGTAGGAGGGCGCGGCGGTCGCTG17.6923076923076925No Hit
CCCCCAATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGCGTCCGAG17.6923076923076925No Hit
ATCTTATACTTAGCTTCAAACTCTGTAAGATCTTTCTTCTTTTTCTCCAA17.6923076923076925No Hit
GTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAAC17.6923076923076925No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)