FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p7D1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p7D1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTGATGTTTCTACCAAAAACATTGAGGTTAGCGTTTGAAGAAGGGGTTC116.666666666666664No Hit
AGTATGATATGTGCATAGCTCGAAATGAAGAAGCTCATCGTATTCAACCT116.666666666666664No Hit
GACATAAATAATACTGAAAACACAAGTACATAAGCCAAGAAAAGAAAATC116.666666666666664No Hit
TAACGAGAGTTTGTCCATTCTAGCGGAGATCTGCTCTTTTGAATAACAGA116.666666666666664No Hit
CGTGTGCTCTTCCGATCTTGGCTGGGAGACGTGTGCTCTTCCGATCTTGG116.666666666666664Illumina Multiplexing PCR Primer 2.01 (95% over 22bp)
GGAGAAGGACTACAACGTTGCCATGGCGGCTTTGGCCTTTTTGGCCTTGA116.666666666666664No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)