FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p7C9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p7C9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116
Sequences flagged as poor quality0
Sequence length151
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGCTTAGCAGTTGCTCCCGTGCTGGGTTCTTTTGCGCCCTTCCTACAT10.8620689655172413No Hit
GCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCTGCAAAATGGATC10.8620689655172413No Hit
ATAGCATGCGATAACATCAAAGCAAATCGAACCTAAAGACATGGCCATCG10.8620689655172413No Hit
TTACAATAGAAGAGCAAAGATTTTTGACAAGAGTTCTAAGATCTTCAAGA10.8620689655172413No Hit
GACTAGGACGGTATCTGATCGTCATCGAGACCCCAACTTTCGTTCTTGAT10.8620689655172413No Hit
ACTGCGAGGAGCCAACCCTAGTACGAGAGGACTGGGTTGGGCCAACCTAT10.8620689655172413No Hit
GTCTCAGCGTCAACCATGAACGTTGCACCCCACACCTCACCTGAGCTGTC10.8620689655172413No Hit
CAGCTTGACAAATCGCAACGAGGAACGTTGTTGACATAAGCTTGAGAATA10.8620689655172413No Hit
GTACTTGTTCGCTATCTGTCTCTCGCCCTTATTTATACTTGTAATTAATT10.8620689655172413No Hit
ATATTCCACAATGAAAAAATTCAAGTAATCAGAACCAGATAGCTTTAGGT10.8620689655172413No Hit
ATCGTATTCTACAAGAGAAAACATACAAATAGTTAATCAATGAAATGAGC10.8620689655172413No Hit
CATGGAACCTTTCCCCTCTTCGGCCTTCAAATTTCTCATTTGAATATTTG10.8620689655172413No Hit
TCGTTGAGATCTATCAAATTCTCAGAGACTACTCAAAGAAACCAATCTAG10.8620689655172413No Hit
ATGAACCTCTTTCATAAAACCAAGAAAAACACCTCTCACTATCAAAAACC10.8620689655172413No Hit
GCGTAGTGGAAAGTGTTGGTGAAAATGTGAAGGAAGTGGTAGAAGGAGAC10.8620689655172413No Hit
CATATCTTCATATAAAAAAATCCCACAATCTGAACAAACTCACTCAATAA10.8620689655172413No Hit
AATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGT10.8620689655172413No Hit
ATACAGAACTGTTTCGAGAAAAGAGAAACCGAGACGTCATCATGGATTGA10.8620689655172413No Hit
GTTGCGTTGATCTCATCGTCTACAATCATACCCTGAGTTTCAAAAACCAG10.8620689655172413No Hit
AATATGAAGCGCATGGATAAAAGTTATGAATTCGAATGAAAGACAATTCC10.8620689655172413No Hit
GTTTCCAGCTTTAACTATCTTCTTAATGAAAATAATATTCTTCAGTAGGC10.8620689655172413No Hit
GGATAACATCATAGGATTTCGATCCTATTGTGTTGGCCTTCGGGATCGGA10.8620689655172413No Hit
CAAATAAGGTGCCAGCGGAGTCCTATAAGCAACATCCGCTGATCCCTGGT10.8620689655172413No Hit
ACCTGTAATAGCCTCAAAATTCCATGGCCTAAACGGCCATAGACCCTCTA10.8620689655172413No Hit
CCACCATGGAAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAAA10.8620689655172413No Hit
ACCCTAAGGGACCGTGTAATTCCGCCAGAATCCCGATCAAACCCATCGAT10.8620689655172413No Hit
CATCTAAAAACTCAGCTAAACCAGAACAGAACTGAAAACAACCAAATTAT10.8620689655172413No Hit
GAGTTAAGAAAAGCATACAAAGGCACTCATTCATGTCTCTCATTGGAACA10.8620689655172413No Hit
TCCCAAACTAAGCCCATCGCCATTTATACTCCGGGTCCAAAATGTCGAAT10.8620689655172413No Hit
TGTCTTATCTTTGAAATATGAATTAATTCTTGCGAGGTTAGTTAATAAAA10.8620689655172413No Hit
CCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGA10.8620689655172413No Hit
CTTTCGAGTCAGCAAATTGGAAAGAGTACAATCAAAATCCCTAAACTAGG10.8620689655172413No Hit
GACCGAAAGCGAACAAGTACCGAGAGGTAAAGATGAAAACGACTTTGAAA10.8620689655172413No Hit
ATAAAGCAATCCCCTCCTCCTCCGGTCCAATGCACAGCTACAAATCAATC10.8620689655172413No Hit
CAGTAGTGGCCCTCTCTCTTTATTAACTTCTTTTATTTTACTTTTTCCCA10.8620689655172413No Hit
GAAAAAGACGCATTAGGAGTGCCGGCTATGAGAAACTAAGCCGTTCGTAA10.8620689655172413No Hit
AAGTTATACCCTCACAGCTATGAAGATTGAGAACTGTCAACATGGGAAGG10.8620689655172413No Hit
CTAAATACCAGGGTAAAGAGCCTCCACAAATTGTTCCCCAATTTCAACCA10.8620689655172413No Hit
TCATCAGGCAGAGGCATATCAGGGTTGGAAAGCAATTGGTGAACATTCCA10.8620689655172413No Hit
CCTCTCAAGCTTGTGGATGGTGGAGAATCACAGAGAACCTTCATCTACAT10.8620689655172413No Hit
GATTTTAAGCATATCAATAATCTTATGAAATTAAAATAACAACCAATAAA10.8620689655172413No Hit
GAGAATAAGCATAACAATAACCGGAGGAAAAGATACTAACCAGGATTCCC10.8620689655172413No Hit
TATAGAAACAGTCAAGCAGTTCTAAAACTCGGCAAGAAACCAAAAGAGAA10.8620689655172413No Hit
AAGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTAC10.8620689655172413No Hit
GACAAGGACCGAATCAGAACGTCTTCGAGCCCCCAACAAACGAAGAACAT10.8620689655172413No Hit
GCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGA10.8620689655172413No Hit
CTGGATACAATAGCATGGGATAACATCATAGGATTTCGATCCTATTGTGT10.8620689655172413No Hit
GAACTAAAGGACAAGTAAAAAGGAGAGATATTTGCAGACGACGAGGTACA10.8620689655172413No Hit
ATGAAAACCAATGCTAATCAATCCAGAGAGAAGCCTTCCTTAGAGAACTC10.8620689655172413No Hit
GACAATGAAATAAGAATGCCCCCGACTGTCCCTGTTAAACATTACTACGA10.8620689655172413No Hit
GAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGCTCTCTC10.8620689655172413No Hit
TGCATGCTCACGCGATGACATTAGCCCATCTGGCTGGAGCATCTGCAGAG10.8620689655172413No Hit
CTCTGAAGTTGCTCAGCCAGATCAGGCAAGAATCTTGGCCCTGAATGCCT10.8620689655172413No Hit
CACATAAGGTGCCAGCGGAGTCCTAAAATCAACATCCGCTGATACCTGGT10.8620689655172413No Hit
ATGGGGAACTATGCCTGAGCGGGGTATAGCCGGAGGAAACTCTGCTGCAA10.8620689655172413No Hit
GTCATGCCCAGTGCGTCTCTGCCGGGTCGAATCCCAGGTGAACAGCGCAA10.8620689655172413No Hit
CTCGTAGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACGACGTGCCTC10.8620689655172413No Hit
GGATAGTATACAGGGACAGTGGGAATCTCGTTAATCAATTCATGCGCGTC10.8620689655172413No Hit
ATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAA10.8620689655172413No Hit
GCAATGGAAAGAGAGAAAGGACGAGGTCTTGACCGTCATCTTTTGCCCGA10.8620689655172413No Hit
CCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTC10.8620689655172413No Hit
ATGTGTACATGGCGAAGCTCGCCGAGCAGGCGGAGCGTTACGAAGAGATG10.8620689655172413No Hit
CTCCGAACTACAACCCTTAATCTGGCTCAAATGTTACGCAAGTGTGGGGC10.8620689655172413No Hit
TTGCGCGACTGCTGCCTTCATTGGATGTGGTAGCAGTTTCTCAGGCTCCC10.8620689655172413No Hit
GTATATTGCAGAAGCTCAACAATGAAAAACAACAAGAAGCTTCAAGATCA10.8620689655172413No Hit
CGTCTTCGGCGTTCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGACGGAC10.8620689655172413No Hit
TTGAAGCCGTCCAAAGAACTCTTGTACATGACAGCTTCACCAGACGTCAA10.8620689655172413No Hit
GTTTCTCTACAAGAGCAATCTCGGGAGCCATAAACACCTGCGTTCCCATA10.8620689655172413No Hit
GTGCCAGCGGAGTCCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCG10.8620689655172413No Hit
CTCGAATTCCTTCTCTTCAAAATCAGAAATGGCTCAAGTGGTTGCTACCA10.8620689655172413No Hit
CGACAGGCATGCTCACACTCGAACCCTTCTCAGAAGATCAAGGTCGGTCG10.8620689655172413No Hit
TCCTTATGTTGGCGCGTGATCCGATCATTACCCGTACCGATCGTCCGTTT10.8620689655172413No Hit
ATCTAGACTGAATCTGAAAGATCCAGGATCAGACTACTGATCACAAAAAC10.8620689655172413No Hit
GAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGGAA10.8620689655172413No Hit
ACGTTACCGTTGCAGCAGAAATCTTACATAAAATCCTTCACAAACCTCTC10.8620689655172413No Hit
CTACTAGATCGATCCATTAGTATTAAGACCATATACCCAAGACAGACGAG10.8620689655172413No Hit
GTTGTAAGTATCCTTCTATAACGTCTCAAAAAAGAAACGGCATAAAAGGA10.8620689655172413No Hit
TTCTTGCACTTCGGACTAAGAGTAAAGAATCACACCTACAGTACGCATAA10.8620689655172413No Hit
GTTTTGAACAACTACAAGATCTGTTTATTGAGATGTTTCAAGGATACGCT10.8620689655172413No Hit
CACTTAAACAACTTAAGGATAGATTCAAAAATGTCGCACTCGACCGTTCT10.8620689655172413No Hit
CCGCTACATGTGGCGGCTCATAGCGGTCATACCACTATTGTTGAGGCTTT10.8620689655172413No Hit
ATCTCGTACATCCCGATACAACACAGTAGGAACAATTGGTTTAGATAGGA10.8620689655172413No Hit
CAAAAACACAACACCACACCAATAATTATCAAAAATAGTAAAGAAATCTT10.8620689655172413No Hit
GGTCATCATGGATCACACCAAACTGGAACAACAACAAATTATGTTACTAC10.8620689655172413No Hit
GGATATTGTGGGCATAAGTCAGGATGAGCAGGAAGGGATACTTCGCACAC10.8620689655172413No Hit
ATCTTCAACAGTGAGGCCCGCATCAGAGAGAGCTTTCTCTAAAGGCCTCT10.8620689655172413No Hit
TTACTCTAAACATTCGCTTAACACAAAAAAAAACTATTCAAACATCAATC10.8620689655172413No Hit
GGATACATTAGCATGGGATAACATCATAGGATTTCGATCCTATTGTGTTG10.8620689655172413No Hit
CATATGGAGGGCTAACCACAACCTCTACAACATCCTGTGAAGGAACCTGA10.8620689655172413No Hit
GATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGG10.8620689655172413No Hit
GCACCAGACTTGCCCTCCAATGGAACCTCGTTAAGGGATTTAGATTGTAC10.8620689655172413No Hit
GAGCACACGTCTCCCGTCGCAGATCCGAACAGCACACGTCTCACGTGGCA10.8620689655172413No Hit
AAGTAACTGCCACTGGCCTTGCTCCAGAAATTGCTTACTTTCACACAAAG10.8620689655172413No Hit
GAATGAATCGAAAAGAGAAACCATTTTACACCGAATACGACCCCACAACT10.8620689655172413No Hit
CTGTGAGGGAGCGGTACTGCTGTGAACCTCTTGAGGTGAGAGGAGCAAAA10.8620689655172413No Hit
TTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAAAATCGG10.8620689655172413No Hit
AAATACTTCTCCATTGTTCCTTACAAATTGTATATCCGACACAAAACCCA10.8620689655172413No Hit
ACAAACAAACTATAACTGATTTAATGACCCATACGCAGTTTCACAGTCTC10.8620689655172413No Hit
CAATCGCATCGGCATAAAGGTCCGGATACCACTTCAAAAGGATTTACGCG10.8620689655172413No Hit
GACAAACATCAGATACAATAGCAGATGAATCGATCAAATTAAAAATGATG10.8620689655172413No Hit
CTTCGAGGCCGGCGGCGTGGTGACCGTGACCCAGGACTCCTCCCTGCAGG10.8620689655172413No Hit
TTGGAGCAATGTGTTGATGCCAGCAACAAAGAGAATAGTCTGGATCACCT10.8620689655172413No Hit
CTTTTTTATTTAATAAAGGATAAAAGCATGCCTCATCCTGTCCTGCGGCC10.8620689655172413No Hit
AACAAGTACCGCGAAGTAAAGATGAAAAGTACATTCAAAAGAGAGTCAAA10.8620689655172413No Hit
ATTTTAACCGGATCCCCTTTCGAAGTTCGCGCTTAAGCGCTATCAGACCT10.8620689655172413No Hit
TCTCAGCAGGGGAGACCCCAGGTCAGGCGGCATTACCCGCTCAGTTTAAG10.8620689655172413No Hit
GATAGAAGCAGAAGAAGGCTCACATGATGGAGATCCAGATCAATGGTGGT10.8620689655172413No Hit
CTATAACGATAAGTCTACTCAGTTTGAAGAAGTTAGTCCTCACCATGCTG10.8620689655172413No Hit
CTCGTAGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACCACGGGGCTC10.8620689655172413No Hit
GATCTAACCCGGGATCAGCGGATGTTGCTTATAGGACTCAGCTGGCAACT10.8620689655172413No Hit
CCTACAATGAGCTAAACATTCATATTTCACATGATAAACACAAACACGAA10.8620689655172413No Hit
TGACGTTAGATTTCACTAGACCGAGCGTTTTTGGCGCTAAAACCAAGAGC10.8620689655172413No Hit
ATCTTAAAGATTCAAATGACGTTCCAACTGTTAGCCGTGTACTTGACTTT10.8620689655172413No Hit
GTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCTACGAGTCGGGTTGTT10.8620689655172413No Hit
GTTGAGTACATCCCAACTCGTGAATACTACCACAGGCACACAAGGTGCTT10.8620689655172413No Hit
GAAGCAAATATTTCCAACAGCATAGTAGACCCTGAGATAATCCATACTGC10.8620689655172413No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers