FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p7C8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p7C8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCCTACACCTCTCAAGTCATTTAAAAAAGTCGGACTAGAGTCAAGCTCA13.571428571428571No Hit
GTCCAGCAGTTCTTAAACTCGGCAAGAAACCAACAGAGCTTTGTCTCGGA13.571428571428571No Hit
GGCTCTGCCCGTTGCTCTGATGATTCATGATAACTCGACGGATCGCATGG13.571428571428571No Hit
CTCCTAATCTTGTACATCTATCTATCCATCTCTCTTTATTTGAAACTGAA13.571428571428571No Hit
TCTCAGAGCTTGTGAATGATTTCTACAACAATGGTTTACCCTCGAATCTA13.571428571428571No Hit
ATCCGGTCCGCCGATCGATTCGGGGCGTGGACCGACGCGGATTACGGTGG13.571428571428571No Hit
CTTCCGATCTCCCCCGGGACCCAAAAACTTTGATTTCTCATAAGGTGCCA13.571428571428571No Hit
CTCTGGTGGAAGCCCGCAGCGATACTGACGTGCAGATCGTTCGGCGGACT13.571428571428571No Hit
GTTAAAAAGAAAAGATAACTCTTCCCGAGGACACCTACGAAGTCTCCGCC13.571428571428571No Hit
CTCGTAGACAGCGCCTCCTTGTGCGACAGGGTCCTTGCACGACGGGGCTA13.571428571428571No Hit
CACCCTATACGTCCACTTATTGTGTTGGCAGAGTGCTGTGATTTTGGTAA13.571428571428571No Hit
TGAAACATGATATCATAAAGAGAAGATTAGATTCTAATGGCAACACTATA13.571428571428571No Hit
CTTCAACAAATGGTACTCGGAGAAGTTTGTTAAAGGCCAATGGGATAAAG13.571428571428571No Hit
CTTGAAAATCCGGAGGACCGAGTGCCGCTCACGCCCGGTCGTACTCATAA13.571428571428571No Hit
GGCGAAAGACTAATCCAACCATCTAGTACCTGGTTCCCTCCGAAGAATCC13.571428571428571No Hit
GTGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCA13.571428571428571No Hit
CTTCCCGAGGCCCCCGCCGACGTCTCCGGACTCCCTAACGTTGCCGTCAA13.571428571428571No Hit
GGTCCAAGGAGTCTGACATGTGTGTGAGTCAACGGGTGAGTAAACCAGTA13.571428571428571No Hit
ATCCAGCGAAACCACAGCCAAGGGAACTGGCTTGGCAGAATCAGCGGGGA13.571428571428571No Hit
CCCATGGAGGTGGTCGAAGGTGCAGCCATGAAGATTGCACACGAGCTGCT13.571428571428571No Hit
CATTAGCATGGGATAACATCATAGGATTTCGATCCTATTGTGTTGGCCTT13.571428571428571No Hit
GTCCAAGGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAG13.571428571428571No Hit
ATACAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATC13.571428571428571No Hit
ATCTCACAGGGGGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGT13.571428571428571No Hit
GCTTTATGAGCAAGCTATTAAGTATGAGAAAGGTTCGTTTATCACTTCTA13.571428571428571No Hit
GCGGATCATCAACCTTCTCCTCTTACTTACGCCATTACGACATAACCGCA13.571428571428571No Hit
ACACTTCTCAGAAGATCAAGGTCGGTCGGCGGTGCACCCGCGAGGGATCC13.571428571428571No Hit
GGCTTTAAACGATAGAACTCGCGTCCCAGCTCAACCAATCATGAGGTAAA13.571428571428571No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)