FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p7C5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p7C5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length151
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAGAGATACTGGCCAGGAATATGCTGAATTCCTGAACGAATTCATGTTC14.545454545454546No Hit
GTATTAGAATGATTGATCTGTTTAATTGTTTTATTTCTCTTTTTATGTGA14.545454545454546No Hit
CATCTGTACGGAATTCGTAGTATCACAAAGTCATAAGGCGGTTGAAATTC14.545454545454546No Hit
GGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTG14.545454545454546No Hit
CTCTCGTACTAGGTTGAATTACTATCGCGACTCTGGCATCAGTAGTGTAA14.545454545454546No Hit
CATCACGTCCGCATGCATAAAGCCACCAGCCAGCAGCTCGCGCAAGATCC14.545454545454546No Hit
GTTAGAGTTTGTTTGATGGTAACTACTACTAGGATAACCGTATTAATTAT14.545454545454546No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA14.545454545454546No Hit
CTTTACTTGTTCAGGCTGAGGAAATCTTAAGCGAGAACCATTGTTTTGGC14.545454545454546No Hit
CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT14.545454545454546No Hit
TCATTGATCTTCTCCGATTTGAAATCGCCGGCGAAAATGGAATCCTCCGG14.545454545454546No Hit
GCACTAGACATACTGGTGGCAATGGGATTCATAAACTATCACCATTTCTG14.545454545454546No Hit
GATCTGCATGGGGGCCTCACTTCCATGTTCTGTCCACAAATCTGCCTATT14.545454545454546No Hit
CATCATTTCACCAATCAGTACGTTTTTATAAAAAAACAGAATGATAAAAT14.545454545454546No Hit
ATTGCAATGTGTCCTTCACTTTCTCTCACAAGCAATCTTTGGCTGGAATT14.545454545454546No Hit
AGCATAGGCAGGCCTTAGGAAAATTTGAGAGAATGTATGAAGATAGAAAA14.545454545454546No Hit
ATAACTTGAGATCAGATGTTCAGTTTTATTTTATTATTTAATAATAATAA14.545454545454546No Hit
TAGTAAGTAAAATAAATTTAAAATTAGTGTTATTTCACTTGCGACGAAGA14.545454545454546No Hit
GAAGAAGAAAGAACATGATGAAACAGATCAAGAGATGAAAGAAAAAGATA14.545454545454546No Hit
CCCACAAAGGGTGTTGGTCCATTAAGACAGCAGGACGGTGGTCATGGAAG14.545454545454546No Hit
GTCATATCTATTGTGTTAAAGATGTCTGAATTCGATCATAAGGCTTTGCT14.545454545454546No Hit
GGATAAACCTAGCTCCCATCTCTTCCGCTTCCGCTTCCTCTTCCTTGCCT14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)