FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p7B3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p7B3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTAAAAGATAATTGTGAGAAATAGATGATAACCCAAAGGTTTAGCAAT18.333333333333332No Hit
GTGGTTGGTGCTGCTAAAGAAGAAATCATTGCCAATCTCGAGAAGCACAA18.333333333333332No Hit
AATGCGTCCCTTCCATAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAA18.333333333333332No Hit
TCTGGATAAATTAGCATGGGATAACATCATAGGATTTCGATCCTATTGTG18.333333333333332No Hit
GTCTGAGTAAGCTTTTCCACTTCAGCAACCTTCTGCCTATGCATTCTATC18.333333333333332No Hit
GAAATCACATTGCGTTAGCATCCGCAGGGACCATCGCAATGCTTTGTTTT18.333333333333332No Hit
GTACACAACAAAGCCCTGCTTGGCCTTGTAACCCAAACGACGAGCCTTAT18.333333333333332No Hit
CAGGAACACCGTTGACAACAGGTCCCACCTGCCAAAGCTGGTTGGCCGTG18.333333333333332No Hit
TTTTGCAATCGCAGCAAGTCTCTCTGCTGGAAGCATGGCCAGGCCTGTTA18.333333333333332No Hit
TCATCATTGTCACGACTATACAAGAAAGTTTCCTCGAAGAGATCAGAATC18.333333333333332No Hit
AGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGTACGGTCAGTTCAC18.333333333333332No Hit
GTTTTAAAGTAGAGGAAGTTACAACAAGTCAACTGCGTAGGAATAGTTTA18.333333333333332No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)