FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p7B12.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p7B12.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAA110.0No Hit
CCAGTACCGTGAGGGAAAGGAGAAAAGAACCCCTGTGAGGGGAGTGAAAT110.0No Hit
CTTCTAATAAGGAAACATTACTTAGGGTTTTAAGATCGGGTTGCGGTTTA110.0No Hit
GCTTTATACTCTAAGTCATTATACCTTCATAATAATTTACATGGATACAT110.0No Hit
GCATCAGCGTGCTCCGGGCGTCGGCCTGTGGGCTCCCCATTCGACCCGTC110.0No Hit
CAACCACCCTTGGGGAACATTAAGGCGTGGCCTTTTTGGGAAGAGATAAC110.0No Hit
GAAAAGGCCATTCTTGGCTGTGGAGTTTAGCTGGCAATGAATTTCGAGAC110.0No Hit
AACCTAGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTG110.0No Hit
GTTACACACTCCTTAGCGGATTTCGACTTCCATGAACACCGTCCTGCTGT110.0No Hit
CCTTCAACTTGAAGCCATACGTTAGTGGTTGCCTTGACTTTCTTCCGATC110.0No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)