FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p6G9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p6G9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCAACAACGAGATACATTCTCCTTTGTGAATCCTCCACCTCCTGAAAC13.225806451612903No Hit
GGATGATAGAATTCTGCCAAACCCCAGTCAATTAAACGAAGTTTTCGATG13.225806451612903No Hit
TTCATACTCACCTCCTAACAAAAGAAAGGCTGACAAATAGCACGACAACA13.225806451612903No Hit
CCAAAAGACAAAGACTCATACAAAACATAACACGACAAACCAACAGCGGA13.225806451612903No Hit
CTAATGAAAATTAAACACACTAACTCCACCAGACAGGAATGCTAAAAATC13.225806451612903No Hit
CACTTGAGAGGTGTAGGATAAGTGGGAGCTTAGCCCCAAGTGAAATAACA13.225806451612903No Hit
CCACCAGAGTTTCCTCTGGCTTTACCCCGCTCAGGCATAGTTCACCATCT13.225806451612903No Hit
CTCAAACGGAGTACCTTTTGCATGATGGGTCAGCGAGGAAATTGGAAGAG13.225806451612903No Hit
CATTTGTTCGGAAACTTACTCCTGAAACTGCAACACATTACCACTTCACC13.225806451612903No Hit
AATGTATCCAGAGCGTAGGCTTGATTTGAGCACTCTAATTTCTTAAAATT13.225806451612903No Hit
TCAGTATCGCTGCGGGCTTCCACCAGAGTTTCCTCTGGCTTTACCCCGCT13.225806451612903No Hit
ATCTCGCCAGGGCCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGC13.225806451612903No Hit
TTTAAGATAAGCGTCCAAAACTATACGGTATTTGTTTAGGTAGGCGTTGA13.225806451612903No Hit
GTATTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAA13.225806451612903No Hit
ATATAAGAATTTAAAATTAAATTATAATTATAAGATCCAGACAACAAACC13.225806451612903No Hit
CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGAT13.225806451612903No Hit
CCGCAGCTAACTCCGGTTCAGAGATCTGAGCCTTATGATCGAACTCAGAC13.225806451612903No Hit
CAGAAAGAACGTTATAATAGAAGAATAAAACCGATAAGCAGATTGTAAAA13.225806451612903No Hit
CTTCCGATCTGGGCAGAGCCCGGTAATCGCATAAAACTTAAAACTTTACA13.225806451612903No Hit
AAGTATATATGGTTACTACAATGCAGGAAGGTTTTGACAAGTCATATGAT13.225806451612903No Hit
TAACAATACCGGGCTCTTTCGAGTCTGGTAATTGGATTGAGTACAATCTA13.225806451612903No Hit
GAAGATAGTAATACAAAAATCAAAGAATATAAACTAACAATAATAAAAAA13.225806451612903No Hit
TGCCAAGTATGTTTTCATAATCAATAACGAAAGTTGGGGGCTCGAAGAAG13.225806451612903No Hit
AAACACGTCTACCAGGACACAAATGAACAGCAAAAGAATACAAGCATAGA13.225806451612903No Hit
GTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATT13.225806451612903No Hit
TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGTATCAACC13.225806451612903No Hit
ACATCATAGGATTTCCATCCTATTGTGTTGGCCTTCGGGATCGGAGTAAT13.225806451612903No Hit
CTTCCGATAAGCCATTTTCATAAATCACATTGCAATACCATCCGCAGCGA13.225806451612903No Hit
TCCTTGGGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAAACTT13.225806451612903No Hit
GTACAATCTAAATACATAAACGAGGATCCATTCGAGGGAAAGTCTGGTGC13.225806451612903No Hit
CTTATACACATAACCGACACCACGAGACAATACCCATATCAGTCTCCCCT13.225806451612903No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)