FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p6G8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p6G8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AATATAGTCTACCTTCATACGTATAGTATACAAACAAAATATATTGGAGT15.555555555555555No Hit
GAGCATGCCTGTCGGGACCCGAAAGATGGAGAACTATGCCTGAGCGGGGT15.555555555555555No Hit
TACAAACTCAGAAGAAAGCGACAAATTTGTTTAATTCGTACCTTGAATCG15.555555555555555No Hit
TAAATAAGTGAGTTGGAAGAATTGGAATGCGAAAATGAAGAAAAAGATGC15.555555555555555No Hit
TCCTTGGCAAATGCTTCGCAGTTGTTCGTCTTTCATAAAACCAAGAATTT15.555555555555555No Hit
AACCGACACAGGTGGGCGAGTGTAAGAGCACTAAGGCGCGCGAGAGAACT15.555555555555555No Hit
AATTCTCCAAGGCAATATCCGAATATCACAAATCACCCACGCCACATCAG15.555555555555555No Hit
CTGGATACATTATAATTGGATAAAAACATAGGAATTATATCCTATTGAGT15.555555555555555No Hit
CACCCGAACCACAAAGGGGCCCAAAGCCTCCGAGATGGTCAGGGCCACCT15.555555555555555No Hit
CTATTTAAAGTTTGAGAATAGGTCGACGGCGTTCCGCCCCCAATGCCTCT15.555555555555555No Hit
GGTAGGCTCAAGCTAAGATTCTGCTCGTGAGAGAAATGGTATAAGCCTGC15.555555555555555No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAATTAAATGATTTAAGCTTTAAGTAA15.555555555555555No Hit
ATCTTTAACCCGCTCACGAATAGATAAACATAAATCGGAGCACGACCGTC15.555555555555555No Hit
ACACCCAATAGATAACGAAATATCACACTACACAAACCACAAATCTAAAC15.555555555555555No Hit
ATCAACTAGCAGCGAAAAAGGATGCCGCTTAAGAGCGCCACCTATACCCG15.555555555555555No Hit
AAGGTAGGACGTGTCGGCTGCTTTGTTGAGCCGTCAAAAGGAATCGAGAG15.555555555555555No Hit
TGCTAGACCTTTCTAAACCACAAGAAGCATACTCTACAGAAGAGGTGAAA15.555555555555555No Hit
GACTTGGGTATAGGGGCGAAAGACTAATCGAACAATCTAGTAGCTGGTTC15.555555555555555No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)