FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p6G2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p6G2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGATAACATTGCTCCCATGAGTCCAACGAGAGCACCCGAGGCACCAACA19.090909090909092No Hit
CAAGAGGGTCTTTCTTGTGTTGCAAGCAAGCAGCTAAAAGGTATATGATA19.090909090909092No Hit
GACGTAGTCAACGCGAGCTGATGACTCGCCCTTACTAGGAATTCCTCGTT19.090909090909092No Hit
TTGTAATACTTGCCGGATTCTTCCTCGTAACGTGTGAGGTTATTTTTGAA19.090909090909092No Hit
GAGAATAAGCATATCGAATATGTAAACAACAACAAGCCATGTGATTCTCC19.090909090909092No Hit
AAATAAATATACACATAAACGAACTATAAGAAAAACAAAAATCAAAACCA19.090909090909092No Hit
GGTGAAAGCTTTAAGATTTGGTGATGACAAAATCTCTCCTTCTGTTCTTG19.090909090909092No Hit
TTCCAGTATTGATCAAAGCATTGTCCAAGATAATACATCCTACTCAAATA19.090909090909092No Hit
GGGCGAAAGACTAATCGAACCAACAAGAACCTGGTTCCCACCGAAGTTTC19.090909090909092No Hit
GCGTACCCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGA19.090909090909092No Hit
AAGTAACACAAAGCATAGAGATGGTACCTGCGGATGCTAACGCCATGGGC19.090909090909092No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)