FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p6E9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p6E9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATC26.25No Hit
ATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGT13.125No Hit
GGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGA13.125No Hit
GCGCTATAATGACCACTACGTGCGTTTCATTCTCTTCGATCTTATCTTTG13.125No Hit
CTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTACCTCGCGGTACTTGT13.125No Hit
TATTTATGGGACGCATATAATTGTTAGTGTTAAGATGGGAGGAAAAGATG13.125No Hit
GATGTAGAGACCCTGTGGCTTCCTGAAAATGCTCCCATACTTCTGGCAAG13.125No Hit
CTTCTGTGATTGGTGATGTTCAGATCAATAAAGGCTCGTTCATTTCGTAT13.125No Hit
GTCCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGA13.125No Hit
CTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGATGTTATC13.125No Hit
GTTGTACCCCGCCTCCGATTCACGGAGTAAGTAAAATAACGTTAAAAGTA13.125No Hit
CATTCAGGATACCATTGGCGTCGATGTCGAAACAGACAGTAATCTGCGGT13.125No Hit
CCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAAT13.125No Hit
TTTCATAGCAGAGAACATAAGGTATGATGCCTAGTTCATTCTCTGGGCAG13.125No Hit
CCACATGGATGGAGCCAGAATGTGACAAGCTCATGATGGAGTCCATCAAC13.125No Hit
ATCATGGAGGAGAAGCCGAAGGTGACGGAGATGGTTATGCCTCCGCCGCC13.125No Hit
TTCCCAAACAACCCGACTCGTAGACAGCGCCTCGTGGTGCGACAGGGTCC13.125No Hit
CCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAAAATCGGAC13.125No Hit
CTCATAAGGTGCCAGCGGAGTCCTATAAGCAACATCCGCTGATCCCTGGT13.125No Hit
TTCATGGACACACCGGGCTATGACCCCGTCTCGGGCCCCCGGCAGGTGGG13.125No Hit
CTGCACAGATGGTGGAAAGAACGCTGTTTTCCAAGAGAAGTTTATCTTCA13.125No Hit
CTGCCAAGCAAAAGACCGTAAACCACAGTTTCGACAATTCAACCGGTAAG13.125No Hit
CTTCCGCCGAACGGACTTAGCCAACGACACGTGCCTTGGGAGCCTAAGCT13.125No Hit
CTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCTGGC13.125No Hit
CCGCCAGTGCGGTCACTGTTAGAAGCACGATCAGAAGGTTGAGGGAGCAG13.125No Hit
GTGTGCGAGTCAACGGGTGAGTAAACCCGTAAGGCGCAAGGAAGCTGATT13.125No Hit
ATCTCGTGCCCATTTGAATGCCATAAATAATAGAAGAAGAGGGGAAAATG13.125No Hit
TCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGT13.125No Hit
GATCTAGGCCGGGTATAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGG13.125No Hit
TCCTGACACGGGGAGGTAGTGACAATAAATAACAAATACCGGGCTCTTTC13.125No Hit
CATCTTTACCTCGCGGTACTTGTTCGCTATCGGTGTCTCGCCCGTATTTA13.125No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)