FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p6E10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p6E10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATTGTACTCATTCCAATTACCAGACTCGAAAGAGCCCGGTATTGTTAT17.6923076923076925No Hit
TAGATAGGATACGTGCAAGACATGCGAAGAAGAAAAGTGGTTTCCAAACT17.6923076923076925No Hit
GAGGGAAACTTCGGAGGGAACCAGCTACTAGATGGTTCGATTAGTCTTTC17.6923076923076925No Hit
CTAAGAAAGCTAAAGATTTCCTGCCATCCCTGCAAAGAATCAGGAGAATA17.6923076923076925No Hit
GTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCA17.6923076923076925No Hit
CTCATAAGGTGCCAGCGGAGTCCTATAAGCAACATCCGCTGATCCCTGGT17.6923076923076925No Hit
AACAAGTACCGCGAGGTAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAA17.6923076923076925No Hit
CGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATTGGGGGCGCAAC17.6923076923076925No Hit
ACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGGCCGGCTT17.6923076923076925No Hit
TTGTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGGAGTGT17.6923076923076925No Hit
ACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGA17.6923076923076925No Hit
CAAAAATGCTATGCAAACAGTTTTTAAACTCGAATTCAAAAGAAGAAACT17.6923076923076925No Hit
CGATGAGATCTATGACGCCGTTGTAATGTGTTGTGGACATTTCGCAGAAC17.6923076923076925No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)