FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p6D12.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p6D12.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCATACACCTCTCAAGTCATTTCACAAATTCGGACTAGAGTCAAGATCA17.142857142857142No Hit
CTAAAGGGTTATTCTGGATATTAGTTTTTTTCCAGTACATGAAACAGAAC17.142857142857142No Hit
CTACCCATCTTACCCGGGCTCTGCTGGTGTTAAGAAGAGGAATTGAACCT17.142857142857142No Hit
GTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAACTCTGGTGC17.142857142857142No Hit
ATAAAAAAGGCGAGAGAGAGAGAAAAAAACAAATTTCACAAGGCAGAGAG17.142857142857142No Hit
GATGAAAACGACATTGAAAAGAGAGTCAAACAGTGCTGGAAATTGTCCGG17.142857142857142No Hit
GGGGATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCCTCC17.142857142857142No Hit
GTCTTGGAGTTGGCAACAAGAACGTTTTGATCTTGTTGGCGAAGTCAACG17.142857142857142No Hit
GGCCTAAGTTCCCAAAAGGGGCGCCAGAGAGGGTGAGAGCCCCGTCGTGC17.142857142857142No Hit
CCCTCCTACTCATCCAGGCCAGGCTCTTGCACCCCCGCCCGGGTATAGGT17.142857142857142No Hit
TCATTACATATTCCATTAAAATTACTAAAAACTAACAACCAACAAAGCAC17.142857142857142No Hit
ATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGCGGTATAAAACAAGGCA17.142857142857142No Hit
ATCTGATCGTCTTCGACCCACCAACGTTCGTTCTTGAATAATGAAAACAT17.142857142857142No Hit
CATCCTATCTTTTTTTTTTTTTTTTTTTTTTAGCGTAATATATCCAGCTT17.142857142857142No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)