FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p6C7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p6C7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATGGAAACCTAAACAATCGAATTCCGGAGATGATGATCTTCAAAGA13.7037037037037033No Hit
CTGTCGCACCACGAGGCGCTGTCTACGAGTCGGGTTGTTTGGGAATGCAG13.7037037037037033No Hit
CCCCGGCACCCAAAAACTTTGATTTCTCATAAGGTGCCAGCGGAGTCCTA13.7037037037037033No Hit
TGCTCACACTCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGCGGTGAAC13.7037037037037033No Hit
TCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTT13.7037037037037033No Hit
CAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTC13.7037037037037033No Hit
GACTGGTTCATGCCCTGCACAACTGCTGTGAGGACAGAATTCACTTCATC13.7037037037037033No Hit
TGACCCGGCGATACGCTCCTGGTCTTAATTGGCCGGGTCGTGCCTCCCGC13.7037037037037033No Hit
CAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATG13.7037037037037033No Hit
CAATGTGATTGTACCAACGAGAAGCGTTCACATACTGTGAAGTTGGGGGC13.7037037037037033No Hit
CCTACTGAGGGTCGGCAATCGGGCGGCGGGCGCATGCGTCGCTTCTAGCC13.7037037037037033No Hit
CCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAAAATCGGAC13.7037037037037033No Hit
ACTTTATATTCGTTGATGCTGACAAAGACAACTACATCAACTACCACAAG13.7037037037037033No Hit
CCACAGTACTGCTCGGCAATCACCAGCATTTGCAATTATCAACCTCCGTC13.7037037037037033No Hit
ATGATGTAGAGATAGTCAAGAAATGGCCTTTCCTCTAACCAAGAGGTTTC13.7037037037037033No Hit
ACCGTGGATAACGCGTTTGGAGGAGGAGGGAGTAGTAATCAGATGTTTCC13.7037037037037033No Hit
TCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGA13.7037037037037033No Hit
CGCATCGCCAGTTCTGCTTACCAAAAAATGGCCCACTTGGAGCTCTCGAT13.7037037037037033No Hit
GCCGTCGGGGCAAGAGCCAGGCCTCGATGAGTAGGAGGGCGCGGCGGTCG13.7037037037037033No Hit
CCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCATTTTGCCGACTTC13.7037037037037033No Hit
ATCCTAAGAGTCGGGGGAAACCCGTCTGATAGCGCTTAAGCGCGAACTTC13.7037037037037033No Hit
ACCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGG13.7037037037037033No Hit
CTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAA13.7037037037037033No Hit
ACCCGATAGAACTCGCGTCCGAGCTCCAGCTATCCTGAGGGAAACTTCGG13.7037037037037033No Hit
AACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCT13.7037037037037033No Hit
CTTCTCAGAAGATCAAGGTCGGTCGGCGGTGCACCCGCGAGGGATCCCGC13.7037037037037033No Hit
CTTCCAACACAGAAAACAAGAAGAGAGAAAAGTAAAAACTGGCAGGTAAT13.7037037037037033No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)