FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p6C12.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p6C12.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTGGACCCGACGGTGCTCCCGTTCAGGGTAACAGCGGTGGTGGTGGTT15.0No Hit
CAGGAAGTGGAGGGAGTGTATTGTCGTCGGTGTTTTTCAGAAACAGTATA15.0No Hit
CCATAGTTATTAACTCCAACCCATATTCCAAGTGGCATCTCAACAGCACT15.0No Hit
GTGCCCAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTA15.0No Hit
CTATATCCATAATTCAGAAACCCTAATTACCATGAAATCCTTATCCTTTT15.0No Hit
ATACCCGGCCGTCGGGGCAAGCGCCAGGCCTCGATGAGTAGGAGGGCGCG15.0No Hit
GTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGT15.0No Hit
TGCTACTACAACAAAGATATGCACCGACGGCCGCTACTCCCCGTATCGCG15.0No Hit
GGGCTGCATTCCCAAACAACCCGACTCGTAGACAGCGCCTCGTGGTGCGA15.0No Hit
TACAAAAGCAGCAAAAGAGGTGATTTAGAATGTTGCCTATATTTTTGAAT15.0No Hit
ATTTTTAGCTTCTACAAACTCTTCTCTCACACAAGTCAATTTTTACACAA15.0No Hit
CATATGTGGAGTGGAGTTTCCGATGGGACAAGCTTTGGGAGGACACATGA15.0No Hit
CCCTATGACGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCA15.0No Hit
TGCCAAATCAACTAGCCCCGAAAATGGATGGCGCTTAAGCGCGCGACCTA15.0No Hit
CTTTGTGGGTTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCC15.0No Hit
ACTATCACTTTGGAGGTGGAGAGCTCTGACACTATCGACAATGTCAAAGC15.0No Hit
ATCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCG15.0No Hit
AGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCT15.0No Hit
ATACAGGTGTCCTTTATTATTTCATGCGCTGGAGAAAAGGACCGTAAAGG15.0No Hit
GCATTTTACTGTGCAGATAAATGAAGGTCAGAGCAAAAGGATTAGATGAA15.0No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)