FastQCFastQC Report
Tue 11 Sep 2018
H55FTAFXY_n01_p6B7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH55FTAFXY_n01_p6B7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109
Sequences flagged as poor quality0
Sequence length151
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAAATGATAACGTTTAGTCGACTTCTCGCGACGTCGCGGGCGGCGAACC10.9174311926605505No Hit
CGCTAAGGTCCCTAAGCAAATCACTTAGTGTAAAAGGAACTGATCGAGCG10.9174311926605505No Hit
CTGGAGAAGCGTCCTCAGCGACGGACAGGGCCTAAGTTCCCTGGAAAGGG10.9174311926605505No Hit
AAACCGTGCGAATAACTGAATACTGTGTTCACCCTTAGATCACTCCATCT10.9174311926605505No Hit
GCCGCAGATGTTGACGCTGAGATTCAGCAGGAGCTCACTAACGAAGTCAA10.9174311926605505No Hit
GACAAGAAGAAGATTGAAGACTCAATTGAAGCAGCCATTGAATCGCTAGA10.9174311926605505No Hit
TTAATCCCCAGGTATCCGATTCAGAACCACCACCACCACCGTATTGAGAA10.9174311926605505No Hit
TACCCGCTGACTTTAAGAATATCAATAAGCGGAGGAAAAGAAACTAACAA10.9174311926605505No Hit
CAGCACACCTCTACAAAAAAAAAAAAAAAAAAAAATAAATATGAAGACCA10.9174311926605505No Hit
CCATGAAGGAGTTGAGTAGAGCTGGGTAAAGCGAAGAACGATCATGCATT10.9174311926605505No Hit
GGGCAACACACACAAGAGGAACTCCACAAGATAAATAATCTTCATCAGAT10.9174311926605505No Hit
GGGAAAGGATCCATGTGAACGGCACTAGCACATGGGTTAGTCGATCATAA10.9174311926605505No Hit
ATTGAATGGAGATGTTTTTGGTGTCCAGCAACAAGATCCGCCTAACTACG10.9174311926605505No Hit
GAAGTGAGCTGCCTCCATAAGTGATGGCAACTGACAATACTTTCAGCTGA10.9174311926605505No Hit
GTTCCGAACCCGTCGGCTGTCAGCGGACTGCTCGAGCTGCTTCCGCGGCG10.9174311926605505No Hit
CATAAAGCAAAAGACGCAAGGGCACCACCAGGAGTGCAGCCTGCCCCATA10.9174311926605505No Hit
TTTGAATATATGCTACTACCACCAAGATCTCCACCGACGGCCGCTCCGCC10.9174311926605505No Hit
CTCGTAGACAGCGCCTCGTGGTGCGCCAGGGTCCGGGCCCGACGGGGCGC10.9174311926605505No Hit
GATAATAACAACGAGGGTAATAGTAATGACACGTCGTCGTATTGGCCTTT10.9174311926605505No Hit
ACACCGAACACTTACATTGCTAGCAAAATCCCACAACAAATCGCACATAC10.9174311926605505No Hit
GTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCA10.9174311926605505No Hit
AACAACAAAAAACCAAATAAACATCTAAAACCCCTTGAATGACTCAAGGC10.9174311926605505No Hit
GTAAAAAGATAACCCAGGTGTCCTAAGTTGAGCTCTTCGAGATCAGAAAT10.9174311926605505No Hit
GCATAAGGAGCTGCAACGGGGGAAAGGAAATCGGAAAATGGAAGTGCAAG10.9174311926605505No Hit
CCTAAGAACCCTCGAAAGCGCCGCCAGAGAGCGAGACAGCCCCGACCAGC10.9174311926605505No Hit
GTCTAGAACTCCGTCAAGGACGCCGAATCAAACAGTTTCAGAAAATCGTA10.9174311926605505No Hit
ATTACGGAGAGGGAGCCTGAGAAATGGCTACCACATCCAATGAAGGCAGC10.9174311926605505No Hit
CACTTAGCTCATCGGGTGAAGGAGGTCTAGGTGCCTCTTCAGGATAAACA10.9174311926605505No Hit
CATGTCAGACTCCTTGGTCCGTGTTCAAGACGGCTCGAATGGGGAGCCCA10.9174311926605505No Hit
ACACAAAAGCAACGAAATCCAATGATGTAATCCCATGATAAAGTATCCAG10.9174311926605505No Hit
ACTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCGGGCT10.9174311926605505No Hit
CTACAAGCGGATTAAGATGTTGTTTTAAATAGAACTTAAAACAAAAGCAG10.9174311926605505No Hit
CCCCATTCGACCCGTCTAGAAACACGGACCAAGGAGTCTGACATGTGTGC10.9174311926605505No Hit
AATATACGCTATTCGAGCTGGAATTACCGCGCCTGCTGGCACCAGACTTG10.9174311926605505No Hit
CTGCATGGCCGTTCTAACATGGAGGAGCGAAATGTCTGGATAAATCCCTT10.9174311926605505No Hit
GACTGGGAACGGCTCTCTCGGGAGCTTTTCCCCGGGCGTCGAACAGTCAG10.9174311926605505No Hit
TATCAGAAATAACCAAGTTATGATTTCATTAGAAAGGAGAATAGGAAATA10.9174311926605505No Hit
GTGCTCTTCCGATCTGACAGGGGAGGTAGTGACAATAAATAACAATACCG10.9174311926605505No Hit
AGCTGGAGCTCGGACGCGAGTTCTAACGGGTAAAGCCAATGATTAGAGGC10.9174311926605505No Hit
CTCCAAAAACTCAAACAACTCCAAGCATTCTTGACAAGATTCTCCATAAG10.9174311926605505No Hit
GTGTTTGGCGCAGCGCTGATCGCCGGCGTCTTGGTGGTGGTGTTTCGAAC10.9174311926605505No Hit
ACTCAAAACAACACGACATGAAATATACCCATATCATCAAAATCAGGCTT10.9174311926605505No Hit
TCTTGTAACGCACCATCACATTGCCTTTAACTCCAACCCCCATAGCGTTC10.9174311926605505No Hit
CACGGGGGGCGACCCCAGGTAATGCGGCATTACCCGCTGAGTTTAAGCAT10.9174311926605505No Hit
AACGACCAGAGGATCTTCACCTAGGAGACCTGATGCGGTTATGAGTACGA10.9174311926605505No Hit
GGATCCATGAGAGCGTCAAAAGCACAGGCGTTAGTCGCGACATACAGTCG10.9174311926605505No Hit
GCTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTAAAATAAAACAAA10.9174311926605505No Hit
GTTCGATTAGACTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCAC10.9174311926605505No Hit
AGCCTACGCTATGGATACATTAGCATGGGATAACATCATATGATTTCGAT10.9174311926605505No Hit
GGTGCGCCGCCGACCGACCTTGATCTTCTGAGAAGGCTACGAGTGTGAGC10.9174311926605505No Hit
CATAAAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTAACAACA10.9174311926605505No Hit
ACACACCCCCGACGAGGAACTCCTATCAAGAAGAACCCTGAATAGCAAAC10.9174311926605505No Hit
CACAAGCACCGTATCTGATGGTCTTGCAGGCCCCAACTTTCGATATACTT10.9174311926605505No Hit
CCACAGGGATAACAGGCTTGTGGCAGCCAAGCGTTCATACCGACGATGCT10.9174311926605505No Hit
GGATAGCTGGAGCTCGGACGCGAGTTCTATCGGCTAAAGCCAATGATTAG10.9174311926605505No Hit
ATTCAGAGCACTGGGCAGAAATCACAATGCGTTAGCATCAACAGGGACCA10.9174311926605505No Hit
CGCTATGAGCCACCACAAGATCAGCCTATAGAGAATCACTGGGTTTCGAG10.9174311926605505No Hit
AAAAACTTCGCCACATTCTGAAATTTACAGCACTCTAAATCGACGAGCTC10.9174311926605505No Hit
GGCTGCTCCATACAAATACCTAATCGAACCAACAATCACCCAACAGAAAC10.9174311926605505No Hit
CTTCCGAACTCCGCCGGGCGGCTCGCCAGAATGCCGACTCTTTCTCCGCC10.9174311926605505No Hit
CCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTAATGGATGAGA10.9174311926605505No Hit
GGCTATTATGGCATTCGCAGGTGATCAGGCGCAGAACTTTCATTACATGG10.9174311926605505No Hit
CTACCAAGGGGGTGAGCATTGGTCGGCTTCTCCCTTCGGTCCGCGATACG10.9174311926605505No Hit
GGGGAGGGCCGGGCTCGATTGTGCTTTCAATTGCACAAGGCGAAGCCTAC10.9174311926605505No Hit
GATGAAAACGACTTTGAAAAGAGAGTCAAAGAGTGCTAGCAATTGTCCGG10.9174311926605505No Hit
TTTCACCTCAGACTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATC10.9174311926605505No Hit
GCTCAACAAACCAGCCGACACGTCCTACCTATTTAAAGTTTGAGAATAGG10.9174311926605505No Hit
CGTTAAAAGTAGTGGTATTTCACTTGCGCCGAAGCTCCCACTTATCCTAC10.9174311926605505No Hit
AATTACAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGGAT10.9174311926605505No Hit
GTCTGGAGAATCGTCCTCACCGACGGACCGGGCCTAAGTTACCTCGAAAG10.9174311926605505No Hit
CAGCTAACTTGAAGTACCACACACAGCTTTGCTACAACTCCCAATTGCAA10.9174311926605505No Hit
TTCCCAAACAACCCGACTCGTAGACAGCGCCGCGTGGAGCGACAGGGTCA10.9174311926605505No Hit
GCCAAGATCTGCACCCACGGCCGCTCCGCCCGGGCTCGCGCCCTAGGCTA10.9174311926605505No Hit
ATCCTCGGTGGAAATGGCTGAAAGCGTCGTTAGGGTTTGTGATGTTGTTG10.9174311926605505No Hit
CAAGGAAGGCAGCAGGCGCCCAAATAACCCAATCCTGCCACGGGGAGGTA10.9174311926605505No Hit
ACCGGATCCCCTTTCGAAGTTCGCGCTTAAGCGCTATCAGACGGGTTTCC10.9174311926605505No Hit
GAGTAAGTATGAACGAATTCAGACTGTGAAACAGCGAATGGCTCAAAAAA10.9174311926605505No Hit
GTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCT10.9174311926605505No Hit
ACCAAACTCCCCCCGGAACCCAAAAACTTAGATATCTCATAAGCTGCCAG10.9174311926605505No Hit
ATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTT10.9174311926605505No Hit
CCTATAAGCAACATCCGCTGATCCCTGGACCCCAACCAATAAGGTTGAGA10.9174311926605505No Hit
TAAGTACTCAAACCAACTTCCACACAAACGTGAACCCAACCCACGTCAGC10.9174311926605505No Hit
GGGCCTAAGTTCCCTGGAAAGCGCCGCCAGACAGGGTGAGAGCCCCCTCG10.9174311926605505No Hit
TCAACGGCATGGGTTCACGTGTTACAGTCTCGAACAACTTGGAACAGATC10.9174311926605505No Hit
TTGTTACACACTCCTAAGCGGATTACCACTTCCAAGACCACCGTCCTCCT10.9174311926605505No Hit
GTATATACCCAAAGGATTATAAATCTTGCTACTATAAAGACACATGCACA10.9174311926605505No Hit
GCATTAGGAGACTTAATGGTGTCTCGGTTCTCGCAATCTTCTGTTTCTTT10.9174311926605505No Hit
GAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGT10.9174311926605505No Hit
GTCCCAAGGCTCGCTTCGGCGGGTCGATCCGGGCGGAGGACATTGTCAGC10.9174311926605505No Hit
CAACAAACCCCGACTTATGGAAGGGACGAATTTAATAGATAAAAGGTAGA10.9174311926605505No Hit
CGGCTGCAGGCACCAGACATGCCCTCCAAAGGATCCACGTAACTCTCTCT10.9174311926605505No Hit
ACCTCGCGGTACTTGTTCGCTATCGGTCTCTCTCCCGTATATAGCCTTGG10.9174311926605505No Hit
CAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTG10.9174311926605505No Hit
GGATTTCGACTTCCATGACCACCGTCCTGCTCTCTTAATCGACCAACACC10.9174311926605505No Hit
GTCAAGAATGGATATTCTTAAGATCCATGCAGCTGCAATCGCCAAACATG10.9174311926605505No Hit
GGTCAAGAAACAGAGGACGTGAGAGAATCAATTACGATTCTGAGATGATC10.9174311926605505No Hit
GAACGTCGGCGTGACGCGCCTAGGATACGCCGTGCCGGAGATTGAGCTTG10.9174311926605505No Hit
GGGATGGGTCGGCCGGTCCGCCTTTGGTGTGCATTGGTCGGCTTGTCCCT10.9174311926605505No Hit
CATCCGATCTGCACTGGGAGACGTGTGCACATACCATCAGCACAGGGAGA10.9174311926605505No Hit
AGAATGTACTCATACCAATTACCAGACACCAAAGAGCCCGGTATTGTTAT10.9174311926605505No Hit
ACTAGATGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACG10.9174311926605505No Hit
TAGTAACGCCGAGAGAACCGGGAAGAGCCCAGCTAGAAAATCGCAAGTCT10.9174311926605505No Hit
CTTCGGAGGGAACCAGCTACTAGATGGTTCGATTAGTCTTTCGCCCCTAT10.9174311926605505No Hit
TCCGGCGCTGTTACATAGAACAAATTACAGTGATCAAATCAAGACTACGC10.9174311926605505No Hit
CTCTAGGAGCTGGAACCATCCTCACTGTCACAGATCCACACTTCCCAGTC10.9174311926605505No Hit
TAGTAACGGCGAGCGAACCGGGTAGAGCCGAGGTTCAAATTCGGACGTCT10.9174311926605505No Hit
AATATATAATGCTTCCTGAAAAAAACAACACAATACAGTAGCATGTCTTA10.9174311926605505No Hit
CATCTTTACCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTA10.9174311926605505No Hit
ACGCGGGGTCTTCCCGTTTCTATTAATATTCATCAAAACACGAAGGATAG10.9174311926605505No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)