FastQCFastQC Report
Tue 19 Jun 2018
H3YTNAFXY_n01_dna2-exoI-1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH3YTNAFXY_n01_dna2-exoI-1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10105175
Sequences flagged as poor quality0
Sequence length76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTGTGC38750.021.1399691
ACGTGTG28700.019.5163361
CATCGCG35200.018.59530340
GTGTGCT48200.017.2085972
ATCGCGG23200.016.29567341
GACGTGT21400.015.540681
ATCGGGG58650.015.10042141
GCGGGGT29050.015.05933851
CATCGGG72650.014.88768740
CAGATCA196400.014.5052435
TGTGCTC59350.014.3294553
TGCGGGG17150.014.28485850
AGTCACC203650.014.24627729
CAGTCAC205650.014.15878128
CGGGGTG35500.013.90236452
CCCCGGG14650.013.8552767
TCCAGTC213200.013.83794726
CCAGTCA210200.013.8356527
CGCGGAT11900.013.82571143
AGATCAT198150.013.81194136
Produced by FastQC (version 0.11.5)