H3W35AFXY_n02_adR3wtZT14s79.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H3W35AFXY_n02_adR3wtZT14s79.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	147924
Sequences flagged as poor quality	0
Sequence length	76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	726	0.49079256915713476	No Hit
TCTCGGAAGAGCACACGTCTCGGAAGAGCACACGTCTCGGAAGAGCACAC	201	0.1358805873286282	No Hit
TCCGAGACGTGTGCTCTTCCGAGACGTGTGCTCTTCCGAGACGTGTGCTC	184	0.1243881993456099	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAGTAC	15	0.0022212756	69.998314	14
TGCTTTT	20	0.0069407895	52.498734	43
GTGGATC	20	0.0069407895	52.498734	69
CCCATAA	20	0.0069407895	52.498734	38
GTGCTTA	40	4.5759716E-5	43.748943	11
TTTCGGA	35	0.0012502919	40.01256	1
CTGGTAT	35	0.0012523737	39.999035	62
GCTTATT	35	0.0012523737	39.999035	13
ATCTAGT	45	9.164371E-5	38.88795	7
TACTCTT	45	9.164371E-5	38.88795	20
GTTAGCC	40	0.0024089315	35.01099	3
GGTCCCC	40	0.002412933	34.999157	20
AGGGATG	40	0.002412933	34.999157	7
ATCTGTT	55	2.9813708E-4	31.817415	7
TTAGCCG	45	0.0042898506	31.12088	4
CGTGTGA	60	4.964273E-4	29.165964	70
GGTGCTT	50	0.0071912394	27.999325	10
TCCGTGC	50	0.0071912394	27.999325	8
TATCGGC	50	0.0071912394	27.999325	56
AACAGGA	50	0.0071912394	27.999325	65